RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA911178" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA911178 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3443840 3443840 PRJNA911178_P_NODE_307483_length_211_cov_4.985507_g305009_i0 PRJNA911178 307483 211 4.985507 10.51941977 Dolichomacrostomum uniporum 683722 Platyhelminthes Platyhelminthes 156 1.37e-33   NTclustered gi|261873730|gb|FJ715295.1| 683722 g305009 i0 92.593 55.0473933649289 108 8 51 0 104 211 177 284 Dolichomacrostomum uniporum voucher MTP LS 222 18S small subunit ribosomal RNA gene, partial sequence blastn 11615 156 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Dolichomacrostomidae Dolichomacrostomum Dolichomacrostomum uniporum
7628422 7628422 PRJNA911178_P_NODE_290326_length_241_cov_2.232143_g287852_i0 PRJNA911178 290326 241 2.232143 5.37946463 Metazoa 33208 Platyhelminthes Platyhelminthes 87.9 5.95e-13   NTclustered gi|10944725|emb|AJ270169.1| 104912 g287852 i0 89.855 2.98755186721992 69 6 28 1 39 106 1635 1703 Cirrifera dumosa partial 28S rRNA gene blastn 720 87.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Coelogynoporidae Cirrifera Cirrifera dumosa
18744528 18744528 PRJNA911178_P_NODE_303955_length_228_cov_2.916129_g301481_i0 PRJNA911178 303955 228 2.916129 6.64877412 Vorticeros auriculatum 162278 Platyhelminthes Platyhelminthes 73.1 1.56e-8   NTclustered gi|2316424318|gb|OP626913.1| 162278 g301481 i0 89.474 0.25 57 6 25 0 2 58 1744 1688 Vorticeros auriculatum large subunit ribosomal RNA gene, partial sequence blastn 57 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Prolecithophora Plagiostomidae Vorticeros Vorticeros auriculatum
21293899 21293899 PRJNA911178_P_NODE_182677_length_281_cov_2.163462_g180204_i0 PRJNA911178 182677 281 2.163462 6.07932822 Proteocephalus tetrastomus 100447 Platyhelminthes Platyhelminthes 359 1.36e-94   NTclustered gi|2396160519|gb|OP972512.1| 100447 g180204 i0 90.842 79.7153024911032 273 18 96 4 11 281 4189 4456 Proteocephalus tetrastomus isolate JP244a large subunit ribosomal RNA gene, partial sequence blastn 22400 359 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Proteocephalidea Proteocephalidae Proteocephalus Proteocephalus tetrastomus
22569365 22569365 PRJNA911178_P_NODE_223038_length_259_cov_2.096774_g220564_i0 PRJNA911178 223038 259 2.096774 5.43064466 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.024   NTclustered gi|687173920|emb|LN091496.1| 99802 g220564 i0 100 0.216216216216216 28 0 11 0 1 28 2697 2670 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0087159 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;