RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA911178" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA911178 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5996692 5996692 PRJNA911178_P_NODE_74525_length_409_cov_4.333333_g72062_i0 PRJNA911178 74525 409 4.333333 17.72333197 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 195 6.17e-45   NTclustered gi|294874491|ref|XM_002766937.1| 423536 g72062 i0 85.052 43.4767726161369 194 25 47 4 181 372 131 322 Perkinsus marinus ATCC 50983 40S ribosomal protein S5, putative, mRNA blastn 17782 195 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
18744891 18744891 PRJNA911178_P_NODE_62555_length_442_cov_8.983740_g60104_i0 PRJNA911178 62555 442 8.98374 39.7081308 Parvilucifera corolla 1955061 SAR_Eukaryotes SAR_Eukaryotes 65.8 5.49e-6   NTclustered gi|1248939543|gb|MF197554.1| 1955061 g60104 i0 97.368 0.712669683257919 38 1 9 0 70 107 305 268 Parvilucifera corolla strain Estartit_1 large subunit ribosomal RNA gene, partial sequence blastn 315 65.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Parvilucifera Parvilucifera corolla

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;