contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA911178" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 892372 | 892372 | PRJNA911178_P_NODE_236781_length_252_cov_2.536313_g234307_i0 | PRJNA911178 | 236781 | 252 | 2.536313 | 6.39150876 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 276 | 1.2499999999999998e-69 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g234307 | i0 | 86.939 | 15.0714285714286 | 245 | 32 | 97 | 0 | 1 | 245 | 803444 | 803200 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 3798 | 276 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 3443628 | 3443628 | PRJNA911178_P_NODE_281083_length_243_cov_1.194118_g278609_i0 | PRJNA911178 | 281083 | 243 | 1.194118 | 2.90170674 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 381 | 2.4599999999999995e-101 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g278609 | i0 | 95.062 | 46.1810699588477 | 243 | 10 | 99 | 2 | 2 | 243 | 3043041 | 3042800 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 11222 | 381 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 8544777 | 8544777 | PRJNA911178_P_NODE_172467_length_287_cov_2.126168_g169994_i0 | PRJNA911178 | 172467 | 287 | 2.126168 | 6.10210216 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 272 | 1.8699999999999993e-68 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g169994 | i0 | 84.698 | 3.65156794425087 | 281 | 34 | 97 | 8 | 10 | 287 | 253065 | 253339 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 1048 | 272 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8545905 | 8545905 | PRJNA911178_P_NODE_301147_length_232_cov_3.540881_g298673_i0 | PRJNA911178 | 301147 | 232 | 3.540881 | 8.21484392 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 326 | 1.11e-84 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g298673 | i0 | 92.857 | 90.8146551724138 | 224 | 16 | 97 | 0 | 1 | 224 | 1904523 | 1904746 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 21069 | 326 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 11095674 | 11095674 | PRJNA911178_P_NODE_204129_length_269_cov_2.188776_g201655_i0 | PRJNA911178 | 204129 | 269 | 2.188776 | 5.88780744 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 329 | 1.02e-85 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g201655 | i0 | 89.655 | 2.59851301115242 | 261 | 24 | 96 | 3 | 4 | 262 | 422278 | 422019 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 699 | 329 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 11096172 | 11096172 | PRJNA911178_P_NODE_265569_length_246_cov_0.890173_g263095_i0 | PRJNA911178 | 265569 | 246 | 0.890173 | 2.18982558 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 322 | 1.53e-83 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g263095 | i0 | 91.176 | 221.845528455285 | 238 | 19 | 96 | 2 | 3 | 239 | 802181 | 801945 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 54574 | 322 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 13645468 | 13645468 | PRJNA911178_P_NODE_170191_length_289_cov_1.101852_g167718_i0 | PRJNA911178 | 170191 | 289 | 1.101852 | 3.18435228 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 267 | 8.77e-67 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g167718 | i0 | 83.618 | 40.5190311418685 | 293 | 38 | 100 | 8 | 1 | 289 | 3042506 | 3042792 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 11710 | 267 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 14919791 | 14919791 | PRJNA911178_P_NODE_169332_length_289_cov_1.754630_g166859_i0 | PRJNA911178 | 169332 | 289 | 1.75463 | 5.0708807 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 318 | 2.39e-82 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g166859 | i0 | 89.015 | 127.826989619377 | 264 | 19 | 89 | 6 | 10 | 267 | 3485840 | 3486099 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 36942 | 318 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16194829 | 16194829 | PRJNA911178_P_NODE_189313_length_278_cov_0.873171_g186840_i0 | PRJNA911178 | 189313 | 278 | 0.873171 | 2.42741538 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 407 | 4.74e-109 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g186840 | i0 | 94.052 | 169.787769784173 | 269 | 15 | 97 | 1 | 10 | 278 | 172004 | 172271 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 47201 | 407 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16196002 | 16196002 | PRJNA911178_P_NODE_42413_length_528_cov_1.969231_g39999_i0 | PRJNA911178 | 42413 | 528 | 1.969231 | 10.39753968 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 621 | 3.1499999999999995e-173 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g39999 | i0 | 87.902 | 29.7253787878788 | 529 | 62 | 100 | 2 | 1 | 528 | 1553307 | 1553834 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 15695 | 621 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 16552456 | 16552456 | PRJNA911178_P_NODE_210373_length_266_cov_1.528497_g207899_i0 | PRJNA911178 | 210373 | 266 | 1.528497 | 4.06580202 | Bacteria | 2 | Bacteria | Bacteria | 259 | 1.34e-64 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g207899 | i0 | 85.433 | 71.4924812030075 | 254 | 31 | 94 | 6 | 17 | 266 | 231560 | 231309 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 19017 | 261 | 0.992337164750958 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 19101777 | 19101777 | PRJNA911178_P_NODE_279935_length_243_cov_1.764706_g277461_i0 | PRJNA911178 | 279935 | 243 | 1.764706 | 4.28823558 | Gemmatimonas | 173479 | Bacteria | Bacteria | 283 | 7.14e-72 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g277461 | i0 | 88.703 | 129.263374485597 | 239 | 17 | 96 | 6 | 11 | 243 | 231727 | 231961 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 31411 | 285 | 0.992982456140351 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 20018737 | 20018737 | PRJNA911178_P_NODE_205596_length_268_cov_5.200000_g203122_i0 | PRJNA911178 | 205596 | 268 | 5.2 | 13.936 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 401 | 2.1099999999999995e-107 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g203122 | i0 | 94.318 | 48.8432835820896 | 264 | 11 | 97 | 4 | 5 | 264 | 801397 | 801134 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 13090 | 401 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 21294354 | 21294354 | PRJNA911178_P_NODE_237977_length_252_cov_1.368715_g235503_i0 | PRJNA911178 | 237977 | 252 | 1.368715 | 3.4491618 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 252 | 2.1e-62 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g235503 | i0 | 84.921 | 9.19047619047619 | 252 | 34 | 99 | 4 | 3 | 252 | 422086 | 422335 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 2316 | 252 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 23843597 | 23843597 | PRJNA911178_P_NODE_116199_length_339_cov_2.236842_g113727_i0 | PRJNA911178 | 116199 | 339 | 2.236842 | 7.58289438 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 477 | 4.459999999999998e-130 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g113727 | i0 | 94.788 | 112.410029498525 | 307 | 15 | 91 | 1 | 6 | 312 | 421690 | 421995 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 38107 | 477 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;