RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA911178" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA911178 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19100974 19100974 PRJNA911178_P_NODE_112775_length_343_cov_6.477778_g110303_i0 PRJNA911178 112775 343 6.477778 22.21877854 Paramarteilia 1871453 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|2228688988|gb|ON320521.1| 2844372 g110303 i0 100 1.18367346938776 29 0 8 0 3 31 6222 6250 Paramarteilia canceri voucher s-1-16-13 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 406 54.7 1 Eukaryota Sar   Endomyxa Ascetosporea Paramyxida Marteiliidae Paramarteilia Paramarteilia canceri
21294051 21294051 PRJNA911178_P_NODE_198637_length_272_cov_2.286432_g196164_i0 PRJNA911178 198637 272 2.286432 6.21909504 Polymyxa betae 41456 SAR_Eukaryotes SAR_Eukaryotes 108 5.25e-19   NTclustered gi|2127897050|ref|NC_059071.1| 41456 g196164 i0 76.498 13.3272058823529 217 39 78 10 60 272 20290 20498 Polymyxa betae isolate A26-41 genome assembly, organelle: mitochondrion blastn 3625 108 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Polymyxa Polymyxa betae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;