RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA911178" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA911178 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2167964 2167964 PRJNA911178_P_NODE_253322_length_248_cov_4.365714_g250848_i0 PRJNA911178 253322 248 4.365714 10.82697072 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 130 1.01e-25   NTclustered gi|605060084|gb|KF874224.1| 109801 g250848 i0 87.069 48.5483870967742 116 13 47 2 133 248 233 346 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12040 130 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
4721135 4721135 PRJNA911178_P_NODE_258504_length_247_cov_2.591954_g256030_i0 PRJNA911178 258504 247 2.591954 6.40212638 Craspedacusta sowerbii 128124 Cnidaria other_Eukaryota 412 8.89e-111   NTclustered gi|213495460|gb|FJ423621.1| 128124 g256030 i0 98.298 97.1943319838057 235 4 95 0 4 238 914 1148 Craspedacusta sowerbyi isolate Cs0Yyy10 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24007 412 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Limnomedusae Olindiidae Craspedacusta Craspedacusta sowerbii
4721552 4721552 PRJNA911178_P_NODE_306684_length_217_cov_41.916667_g304210_i0 PRJNA911178 306684 217 41.916667 90.95916739 Ralpharia gorgoniae 498587 Cnidaria other_Eukaryota 150 6.609999999999999e-32   NTclustered gi|166407174|gb|EU272590.1| 498587 g304210 i0 87.879 60.1612903225806 132 10 60 6 82 212 2638 2512 Ralpharia gorgoniae voucher KUNHM 2778 28S large subunit ribosomal RNA gene, partial sequence blastn 13055 150 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Tubulariidae Ralpharia Ralpharia gorgoniae
9820919 9820919 PRJNA911178_P_NODE_309328_length_196_cov_7.869919_g306853_i0 PRJNA911178 309328 196 7.869919 15.42504124 Acropora formosa 126732 Cnidaria other_Eukaryota 87.9 4.65e-13   NTclustered gi|692518457|gb|KJ648506.1| 126732 g306853 i0 86.42 41.7040816326531 81 9 41 2 11 90 387 466 Acropora formosa isolate HN14 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8174 87.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora formosa
14003650 14003650 PRJNA911178_P_NODE_143351_length_310_cov_8.810127_g140878_i0 PRJNA911178 143351 310 8.810127 27.3113937 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 86.1 2.86e-12   NTclustered gi|2545927690|gb|OR270023.1| 35589 g140878 i0 82.653 29.2774193548387 98 15 32 2 213 310 189 284 Myxobolus sp. voucher Myxobolus sp large subunit ribosomal RNA gene, partial sequence blastn 9076 86.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus sp.
16196368 16196368 PRJNA911178_P_NODE_80513_length_396_cov_1.405573_g78046_i0 PRJNA911178 80513 396 1.405573 5.56606908 Ceratomyxa leatherjacketi 1579382 Cnidaria other_Eukaryota 82.4 4.83e-11   NTclustered gi|730837044|gb|KM392428.1| 1579382 g78046 i0 87.5 0.285353535353535 72 8 18 1 325 396 380 450 Ceratomyxa leatherjacketi isolate LJ-GB-B 28S ribosomal RNA gene, partial sequence blastn 113 82.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratomyxa Ceratomyxa leatherjacketi
20019746 20019746 PRJNA911178_P_NODE_40496_length_539_cov_13.096567_g38088_i0 PRJNA911178 40496 539 13.096567 70.59049613 Orbicella faveolata 48498 Cnidaria other_Eukaryota 56.5 0.004   NTclustered gi|1176089270|ref|XM_020759344.1| 48498 g38088 i0 94.595 0.122448979591837 37 0 6 2 330 364 2162 2126 PREDICTED: Orbicella faveolata uncharacterized LOC110053151 (LOC110053151), mRNA blastn 66 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
21295174 21295174 PRJNA911178_P_NODE_55357_length_467_cov_4.124365_g52920_i0 PRJNA911178 55357 467 4.124365 19.26078455 Calycella syringa 314529 Cnidaria other_Eukaryota 122 3.4099999999999995e-23   NTclustered gi|256674468|gb|FJ550372.1| 314529 g52920 i0 86.087 21.5546038543897 115 14 24 2 130 243 1567 1454 Calycella syringa 28S ribosomal RNA gene, partial sequence blastn 10066 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Campanulariidae Calycella Calycella syringa
22569749 22569749 PRJNA911178_P_NODE_269778_length_245_cov_1.569767_g267304_i0 PRJNA911178 269778 245 1.569767 3.84592915 Anemonia sulcata 6108 Cnidaria other_Eukaryota 99 2.8e-16   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g267304 i0 91.549 41.0285714285714 71 6 29 0 25 95 9326394 9326464 Anemonia sulcata genome assembly, chromosome: 14 blastn 10052 99 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
22927954 22927954 PRJNA911178_P_NODE_277058_length_244_cov_0.900585_g274584_i0 PRJNA911178 277058 244 0.900585 2.1974274 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|1778028076|ref|XM_031695381.1| 6105 g274584 i0 100 0.745901639344262 30 0 12 0 55 84 6550 6579 PREDICTED: Actinia tenebrosa uncharacterized LOC116288579 (LOC116288579), mRNA blastn 182 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
25117849 25117849 PRJNA911178_P_NODE_164000_length_293_cov_1.377273_g161527_i0 PRJNA911178 164000 293 1.377273 4.03540989 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 220 7.04e-53   NTclustered gi|2782890104|ref|XM_067066014.1| 252671 g161527 i0 80.623 14.4982935153584 289 52 98 4 6 292 865 1151 PREDICTED: Clytia hemisphaerica transitional endoplasmic reticulum ATPase-like (LOC136809477), mRNA blastn 4248 220 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;