RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA911178" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA911178 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1250673 1250673 PRJNA911178_P_NODE_59241_length_454_cov_1.052493_g56795_i0 PRJNA911178 59241 454 1.052493 4.77831822 Candidatus Methylomirabilis 1170227 Bacteria Bacteria 351 3.87e-92   NTclustered gi|507148395|ref|NR_103198.1| 671143 g56795 i0 82.423 317.671806167401 421 57 91 12 33 443 1510 1097 Candidatus Methylomirabilis oxyfera 23S ribosomal RNA gene, complete sequence blastn 144223 351 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis oxygeniifera
22570715 22570715 PRJNA911178_P_NODE_96118_length_367_cov_2.071429_g93648_i0 PRJNA911178 96118 367 2.071429 7.60214443 Candidatus Methylomirabilis oxygeniifera 671143 Bacteria Bacteria 71.3 9.62e-8   NTclustered gi|258590833|emb|FP565575.1| 671143 g93648 i0 92.157 21.6130790190736 51 2 16 2 30 79 1646719 1646768 Candidatus Methylomirabilis oxyfera complete genome blastn 7932 71.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis oxygeniifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;