RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA909412" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA909412 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
890698 890698 PRJNA909412_P_NODE_8301_length_184_cov_4.420690_g8160_i0 PRJNA909412 8301 184 4.42069 8.1340696 Lottia gigantea 225164 Mollusca Mollusca 52.8 0.016   NTclustered gi|676459712|ref|XM_009057142.1| 225164 g8160 i0 100 0.152173913043478 28 0 15 0 110 137 1442 1469 Lottia gigantea hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
4719240 4719240 PRJNA909412_P_NODE_7104_length_198_cov_2.088050_g6963_i0 PRJNA909412 7104 198 2.08805 4.134339 Mya arenaria 6604 Mollusca Mollusca 73.1 1.32e-8   NTclustered gi|2427374800|ref|XM_052912934.1| 6604 g6963 i0 80.198 0.51010101010101 101 16 50 3 100 198 1229 1131 PREDICTED: Mya arenaria 26S proteasome regulatory subunit 10B (LOC128209087), mRNA blastn 101 73.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
11094313 11094313 PRJNA909412_P_NODE_8989_length_178_cov_2.388489_g8848_i0 PRJNA909412 8989 178 2.388489 4.25151042 Aplysia californica 6500 Mollusca Mollusca 52.8 0.015   NTclustered gi|1897911960|ref|XR_004858657.1| 6500 g8848 i0 96.875 0.179775280898876 32 0 18 1 16 47 139 169 PREDICTED: Aplysia californica uncharacterized LOC118477858 (LOC118477858), ncRNA blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
16193480 16193480 PRJNA909412_P_NODE_3313_length_289_cov_1.584000_g3172_i0 PRJNA909412 3313 289 1.584 4.57776 Dreissena polymorpha 45954 Mollusca Mollusca 52.8 0.027   NTclustered gi|2364551139|ref|XM_052377903.1| 45954 g3172 i0 100 0.0968858131487889 28 0 10 0 203 230 6312 6339 PREDICTED: Dreissena polymorpha alpha-protein kinase vwkA-like (LOC127846549), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
18742221 18742221 PRJNA909412_P_NODE_3095_length_299_cov_15.069231_g2955_i0 PRJNA909412 3095 299 15.069231 45.05700069 Ctena cf. galapagana NHMUK 20210086 2892552 Mollusca Mollusca 134 9.65e-27   NTclustered gi|2129023951|gb|OL361786.1| 2892552 g2955 i0 90.909 7.54849498327759 99 9 33 0 196 294 4050 4148 Ctena cf. galapagana NHMUK 20210086 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2257 134 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Lucinida Lucinidae Ctena Ctena cf. galapagana NHMUK 20210086
20017280 20017280 PRJNA909412_P_NODE_6636_length_204_cov_1.878788_g6495_i0 PRJNA909412 6636 204 1.878788 3.83272752 Octopus bimaculoides 37653 Mollusca Mollusca 54.7 0.005   NTclustered gi|2427293685|ref|XM_014932038.2| 37653 g6495 i0 96.97 2.65686274509804 33 0 16 1 7 39 1776 1807 PREDICTED: Octopus bimaculoides probable serine/threonine-protein kinase DDB_G0267686 (LOC106881582), transcript variant X2, mRNA blastn 542 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
20375499 20375499 PRJNA909412_P_NODE_10976_length_172_cov_2.421053_g10835_i0 PRJNA909412 10976 172 2.421053 4.16421116 Magallana 147004 Mollusca Mollusca 60.2 8.62e-5   NTclustered gi|2751282572|ref|XM_066086753.1| 29159 g10835 i0 80.769 0.906976744186046 78 13 45 2 4 80 545 469 PREDICTED: Magallana gigas ras-related protein Rab-13 (LOC105324949), mRNA blastn 156 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
21651406 21651406 PRJNA909412_P_NODE_3877_length_267_cov_2.166667_g3736_i0 PRJNA909412 3877 267 2.166667 5.78500089 Metazoa 33208 Mollusca Mollusca 56.5 0.002   NTclustered gi|2694097628|ref|XM_063586004.1| 6551 g3736 i0 100 1.43071161048689 30 0 11 0 24 53 483 512 PREDICTED: Mytilus trossulus uncharacterized LOC134722385 (LOC134722385), mRNA blastn 382 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;