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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA909412" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA909412 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
890668 890668 PRJNA909412_P_NODE_2601_length_329_cov_24.462069_g2461_i0 PRJNA909412 2601 329 24.462069 80.48020701 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 198 3.76e-46   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2461 i0 79.933 28.7173252279635 299 36 90 16 34 329 4039 3762 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 9448 198 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
11094227 11094227 PRJNA909412_P_NODE_11769_length_166_cov_3.236220_g11628_i0 PRJNA909412 11769 166 3.23622 5.3721252 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 307 2.69e-79   NTclustered gi|238617602|gb|FJ973377.1| 188950 g11628 i0 100 100.777108433735 166 0 100 0 1 166 826 991 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 16729 307 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
12369802 12369802 PRJNA909412_P_NODE_1910_length_392_cov_4.291785_g1770_i0 PRJNA909412 1910 392 4.291785 16.8237972 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 719 0   NTclustered gi|300676732|gb|GQ377662.1| 188950 g1770 i0 99.745 37.2678571428571 392 1 100 0 1 392 634 243 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 14609 719 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
13644342 13644342 PRJNA909412_P_NODE_4631_length_242_cov_6.384236_g4490_i0 PRJNA909412 4631 242 6.384236 15.44985112 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 425 1.11e-114   NTclustered gi|300676732|gb|GQ377662.1| 188950 g4490 i0 98.347 99.3223140495868 242 4 100 0 1 242 648 889 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 24036 425 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
17468972 17468972 PRJNA909412_P_NODE_2034_length_378_cov_5.277286_g1894_i0 PRJNA909412 2034 378 5.277286 19.94814108 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 684 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1894 i0 99.211 85.7592592592593 380 1 100 1 1 378 2111 1732 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 32417 684 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
17469014 17469014 PRJNA909412_P_NODE_94_length_1535_cov_8.555481_g71_i0 PRJNA909412 94 1535 8.555481 131.32663335 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1491 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g71 i0 98.805 73.0332247557003 837 10 55 0 426 1262 837 1 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 112106 1491 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
21292614 21292614 PRJNA909412_P_NODE_5397_length_224_cov_2.437838_g5256_i0 PRJNA909412 5397 224 2.437838 5.46075712 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 414 2.1999999999999996e-111   NTclustered gi|302026154|gb|GQ377660.1| 188950 g5256 i0 100 19.8214285714286 224 0 100 0 1 224 253 476 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 4440 414 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
23842893 23842893 PRJNA909412_P_NODE_1439_length_458_cov_9.269690_g1300_i0 PRJNA909412 1439 458 9.26969 42.4551802 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 846 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1300 i0 100 19.1310043668122 458 0 100 0 1 458 347 804 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8762 846 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;