contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA909412" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1249231 | 1249231 | PRJNA909412_P_NODE_12981_length_161_cov_2.008197_g12840_i0 | PRJNA909412 | 12981 | 161 | 2.008197 | 3.23319717 | Rosistilla | 2795779 | Bacteria | Bacteria | 167 | 4.5799999999999995e-37 | NTclustered | gi|1712438206|gb|CP036261.1| | 1930277 | g12840 | i0 | 85.976 | 115.062111801242 | 164 | 14 | 99 | 9 | 3 | 161 | 974730 | 974889 | Rosistilla ulvae strain EC9 chromosome | blastn | 18525 | 167 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Rosistilla | Rosistilla ulvae | |
| 3441497 | 3441497 | PRJNA909412_P_NODE_1863_length_399_cov_2.166667_g1723_i0 | PRJNA909412 | 1863 | 399 | 2.166667 | 8.64500133 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 636 | 8.299999999999999e-178 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g1723 | i0 | 95.489 | 163.611528822055 | 399 | 16 | 100 | 1 | 1 | 399 | 1808 | 1412 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 65281 | 636 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 5077425 | 5077425 | PRJNA909412_P_NODE_12184_length_163_cov_1.725806_g12043_i0 | PRJNA909412 | 12184 | 163 | 1.725806 | 2.81306378 | Gemmataceae | 1914233 | Bacteria | Bacteria | 209 | 7.62e-50 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g12043 | i0 | 90.244 | 356.398773006135 | 164 | 10 | 98 | 6 | 1 | 160 | 3633834 | 3633673 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 58093 | 209 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 5993871 | 5993871 | PRJNA909412_P_NODE_1185_length_515_cov_2.941176_g1048_i0 | PRJNA909412 | 1185 | 515 | 2.941176 | 15.1470564 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 523 | 8.889999999999997e-144 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g1048 | i0 | 89.951 | 240.594174757282 | 408 | 37 | 79 | 3 | 2 | 408 | 1384 | 980 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 123906 | 523 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 5993947 | 5993947 | PRJNA909412_P_NODE_3785_length_270_cov_1.909091_g3644_i0 | PRJNA909412 | 3785 | 270 | 1.909091 | 5.1545457 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 455 | 1.6100000000000002e-123 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g3644 | i0 | 97.037 | 84.9037037037037 | 270 | 8 | 100 | 0 | 1 | 270 | 5153588 | 5153319 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 22924 | 455 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 12728684 | 12728684 | PRJNA909412_P_NODE_9410_length_175_cov_1.220588_g9269_i0 | PRJNA909412 | 9410 | 175 | 1.220588 | 2.136029 | Gimesia | 1649453 | Bacteria | Bacteria | 95.3 | 2.42e-15 | NTclustered | gi|1712496122|gb|CP036269.1| | 2527973 | g9269 | i0 | 77.64 | 21.5085714285714 | 161 | 33 | 92 | 3 | 1 | 161 | 2394735 | 2394892 | Gimesia alba strain Pan241w chromosome | blastn | 3764 | 95.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Gimesia | Gimesia alba | |
| 16193475 | 16193475 | PRJNA909412_P_NODE_1853_length_400_cov_2.445983_g1713_i0 | PRJNA909412 | 1853 | 400 | 2.445983 | 9.783932 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g1713 | i0 | 96.725 | 160.4025 | 397 | 13 | 99 | 0 | 4 | 400 | 653 | 257 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 64161 | 662 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 17468980 | 17468980 | PRJNA909412_P_NODE_3274_length_291_cov_1.416667_g3133_i0 | PRJNA909412 | 3274 | 291 | 1.416667 | 4.12250097 | Lignipirellula cremea | 2528010 | Bacteria | Bacteria | 315 | 3.11e-81 | NTclustered | gi|1712668320|gb|CP036433.1| | 2528010 | g3133 | i0 | 89.02 | 96.7457044673539 | 255 | 26 | 87 | 2 | 35 | 288 | 1144396 | 1144143 | Lignipirellula cremea strain Pla85_3_4 chromosome, complete genome | blastn | 28153 | 315 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Lignipirellula | Lignipirellula cremea | |
| 17468997 | 17468997 | PRJNA909412_P_NODE_6194_length_211_cov_0.953488_g6053_i0 | PRJNA909412 | 6194 | 211 | 0.953488 | 2.01185968 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 379 | 7.489999999999999e-101 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g6053 | i0 | 99.052 | 119.284360189573 | 211 | 2 | 100 | 0 | 1 | 211 | 664 | 874 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 25169 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 19100684 | 19100684 | PRJNA909412_P_NODE_11135_length_171_cov_3.272727_g10994_i0 | PRJNA909412 | 11135 | 171 | 3.272727 | 5.59636317 | Prosthecobacter | 48463 | Bacteria | Bacteria | 316 | 4.6e-82 | NTclustered | gi|219846433|ref|NR_026024.1| | 48464 | g10994 | i0 | 100 | 100.005847953216 | 171 | 0 | 100 | 0 | 1 | 171 | 1230 | 1060 | Prosthecobacter fusiformis strain FC4 16S ribosomal RNA, partial sequence | blastn | 17101 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 20375513 | 20375513 | PRJNA909412_P_NODE_17536_length_150_cov_2.846847_g17395_i0 | PRJNA909412 | 17536 | 150 | 2.846847 | 4.2702705 | Bacteria | 2 | Bacteria | Bacteria | 207 | 2.46e-49 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g17395 | i0 | 91.946 | 10.04 | 149 | 10 | 99 | 2 | 2 | 150 | 2582829 | 2582975 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 1506 | 207 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 23842953 | 23842953 | PRJNA909412_P_NODE_7139_length_197_cov_4.392405_g6998_i0 | PRJNA909412 | 7139 | 197 | 4.392405 | 8.65303785 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 63.9 | 7.88e-6 | NTclustered | gi|2907625648|emb|OZ223208.1| | 2026780 | g6998 | i0 | 95.122 | 1.11675126903553 | 41 | 1 | 20 | 1 | 104 | 143 | 1495077 | 1495117 | MAG: Planctomycetota bacterium isolate 604ccff8-4b2f-4b13-82eb-4b7433267518 genome assembly, chromosome: 1 | blastn | 220 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;