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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA909412" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA909412 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
890689 890689 PRJNA909412_P_NODE_6781_length_202_cov_2.226994_g6640_i0 PRJNA909412 6781 202 2.226994 4.49852788 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 257 3.47e-64   NTclustered gi|1803019099|gb|MT007871.1| 56452 g6640 i0 97.973 38.5940594059406 148 3 73 0 1 148 1168 1021 Petalomonas cantuscygni strain CCAP 1259/1 small subunit ribosomal RNA gene, partial sequence blastn 7796 257 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
2165960 2165960 PRJNA909412_P_NODE_10502_length_172_cov_2.879699_g10361_i0 PRJNA909412 10502 172 2.879699 4.95308228 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 95.3 2.36e-15   NTclustered gi|2119416825|ref|XM_044686971.1| 51637 g10361 i0 87.654 9.09883720930233 81 10 47 0 1 81 579 659 Naegleria lovaniensis uncharacterized protein (C9374_011328), partial mRNA blastn 1565 95.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
9818600 9818600 PRJNA909412_P_NODE_8908_length_179_cov_1.742857_g8767_i0 PRJNA909412 8908 179 1.742857 3.11971403 Euglena agilis 96764 Euglenozoa other_Eukaryota 300 4.9e-77   NTclustered gi|388269618|gb|JQ398653.1| 96764 g8767 i0 97.175 55.4078212290503 177 5 99 0 3 179 193 369 Euglena agilis strain ACOI 1232 large subunit ribosomal RNA gene, partial sequence blastn 9918 300 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena agilis
11452926 11452926 PRJNA909412_P_NODE_16749_length_151_cov_2.616071_g16608_i0 PRJNA909412 16749 151 2.616071 3.95026721 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 254 3.15e-63   NTclustered gi|60687330|gb|AY821957.1| 315795 g16608 i0 100 49.6622516556291 137 0 91 0 15 151 961 1097 Uncultured Sphenomonadales clone CH1_S2_16 small subunit ribosomal RNA gene, partial sequence blastn 7499 254 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida     uncultured Sphenomonadales
14918700 14918700 PRJNA909412_P_NODE_7272_length_196_cov_1.541401_g7131_i0 PRJNA909412 7272 196 1.541401 3.02114596 Neobodo sp. 2815825 Euglenozoa other_Eukaryota 239 1.21e-58   NTclustered gi|1996609214|gb|MW694333.1| 2815825 g7131 i0 88.776 2.85204081632653 196 20 99 1 1 194 880 685 Neobodo sp. isolate G08 small subunit ribosomal RNA gene, partial sequence blastn 559 239 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo sp.
17468907 17468907 PRJNA909412_P_NODE_11974_length_165_cov_1.309524_g11833_i0 PRJNA909412 11974 165 1.309524 2.1607146 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 300 4.46e-77   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g11833 i0 99.394 27.7212121212121 165 1 100 0 1 165 2676 2512 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 4574 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
17468935 17468935 PRJNA909412_P_NODE_15934_length_153_cov_1.342105_g15793_i0 PRJNA909412 15934 153 1.342105 2.05342065 Andalucia godoyi 505711 Root_unresolved Root_unresolved 65.8 1.61e-6   NTclustered gi|484759855|ref|NC_021124.1| 505711 g15793 i0 82.051 0.509803921568627 78 13 51 1 76 153 402 478 Andalucia godoyi strain ATCC PRA-185 mitochondrion, complete genome blastn 78 65.8 1 Eukaryota Discoba       Jakobida Andaluciidae Andalucia Andalucia godoyi
17468941 17468941 PRJNA909412_P_NODE_16454_length_152_cov_1.486726_g16313_i0 PRJNA909412 16454 152 1.486726 2.25982352 Trachelomonas sp. Bidduk050909G 1685802 Euglenozoa other_Eukaryota 178 1.9699999999999993e-40   NTclustered gi|944274410|gb|KT305094.1| 1685802 g16313 i0 88.435 93.8881578947368 147 17 97 0 1 147 318 172 Trachelomonas sp. Bidduk050909G small subunit ribosomal RNA gene, partial sequence; chloroplast blastn 14271 178 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas sp. Bidduk050909G
21651413 21651413 PRJNA909412_P_NODE_5417_length_224_cov_1.383784_g5276_i0 PRJNA909412 5417 224 1.383784 3.09967616 Leishmania 5658 Euglenozoa other_Eukaryota 239 1.42e-58   NTclustered gi|2593250474|emb|OY748421.1| 5660 g5276 i0 85.903 113.732142857143 227 29 100 3 1 224 989893 990119 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 25476 239 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
22567831 22567831 PRJNA909412_P_NODE_5278_length_227_cov_2.106383_g5137_i0 PRJNA909412 5278 227 2.106383 4.78148941 Parafumarolamoeba stagnalis 2872509 Heterolobosea other_Eukaryota 267 6.63e-67   NTclustered gi|2086087549|gb|MZ919148.1| 2872509 g5137 i0 87.826 3.04845814977974 230 25 100 3 1 227 805 576 Parafumarolamoeba stagnalis small subunit ribosomal RNA gene, partial sequence blastn 692 267 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Parafumarolamoeba Parafumarolamoeba stagnalis
23842941 23842941 PRJNA909412_P_NODE_3259_length_291_cov_3.218254_g3118_i0 PRJNA909412 3259 291 3.218254 9.36511914 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 132 3.37e-26   NTclustered gi|290996811|ref|XM_002680930.1| 5762 g3118 i0 83.803 3.6254295532646 142 19 48 4 128 267 1611 1472 Naegleria gruberi aldehyde dehydrogenase (NAEGRDRAFT_35633), mRNA blastn 1055 132 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25116755 25116755 PRJNA909412_P_NODE_5580_length_221_cov_1.730769_g5439_i0 PRJNA909412 5580 221 1.730769 3.82499949 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 409 1.0100000000000001e-109   NTclustered gi|2515557648|gb|OR045415.1| 234921 g5439 i0 100 50.4932126696833 221 0 100 0 1 221 4003 4223 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 11159 409 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;