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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA908278" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA908278 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
890429 890429 PRJNA908278_P_NODE_5721_length_489_cov_10.091346_g5618_i0 PRJNA908278 5721 489 10.091346 49.34668194 Pseudoloma neurophilia 146866 Fungi Fungi 845 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g5618 i0 99.567 89.5685071574642 462 2 94 0 1 462 1519 1980 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 43799 845 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
3440958 3440958 PRJNA908278_P_NODE_1503_length_888_cov_19.260123_g1421_i0 PRJNA908278 1503 888 19.260123 171.02989224 Pseudoloma neurophilia 146866 Fungi Fungi 1570 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g1421 i0 99.65 93.0495495495496 857 3 100 0 32 888 2 858 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 82628 1570 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
8543212 8543212 PRJNA908278_P_NODE_25107_length_258_cov_1.513514_g25004_i0 PRJNA908278 25107 258 1.513514 3.90486612 Nematocida minor 1912983 Fungi Fungi 52.8 0.023   NTclustered gi|2323916580|ref|XM_051478277.1| 1912983 g25004 i0 100 0.108527131782946 28 0 11 0 168 195 614 641 Nematocida minor nuclear export mediator factor NEMF (NEMIN01_2335), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida minor
8543361 8543361 PRJNA908278_P_NODE_6107_length_474_cov_21.620948_g6004_i0 PRJNA908278 6107 474 21.620948 102.48329352 Pseudoloma neurophilia 146866 Fungi Fungi 870 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g6004 i0 99.789 98.9198312236287 474 1 100 0 1 474 860 1333 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 46888 870 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
9818228 9818228 PRJNA908278_P_NODE_31288_length_246_cov_0.890173_g31185_i0 PRJNA908278 31288 246 0.890173 2.18982558 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 455 1.4500000000000002e-123   NTclustered gi|2522768008|gb|OR162445.1| 646526 g31185 i0 100 7.24390243902439 246 0 100 0 1 246 2167 1922 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1782 455 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
9818324 9818324 PRJNA908278_P_NODE_628_length_1236_cov_7.201204_g581_i0 PRJNA908278 628 1236 7.201204 89.00688144 Pleistophora mulleri 249366 Fungi Fungi 1197 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g581 i0 84.554 21.7912621359223 1256 139 99 50 17 1236 1855 3091 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 26934 1197 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
25116196 25116196 PRJNA908278_P_NODE_14060_length_334_cov_1.180077_g13957_i0 PRJNA908278 14060 334 1.180077 3.94145718 Glugea plecoglossi 40978 Fungi Fungi 292 1.7e-74   NTclustered gi|30088591|gb|AY138804.1| 40978 g13957 i0 82.675 5.66766467065868 329 57 99 0 6 334 467 795 Glugea plecoglossi alpha-tubulin (atub) gene, partial cds blastn 1893 292 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugea Glugea plecoglossi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;