RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA908278" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA908278 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3801087 3801087 PRJNA908278_P_NODE_2763_length_678_cov_1.257851_g2661_i0 PRJNA908278 2763 678 1.257851 8.52822978 Metazoa 33208 Echinodermata other_Eukaryota 56.5 0.005   NTclustered gi|1752395462|ref|XM_030999744.1| 7668 g2661 i0 100 0.132743362831858 30 0 4 0 649 678 2266 2295 PREDICTED: Strongylocentrotus purpuratus sodium-coupled monocarboxylate transporter 1 (LOC592711), mRNA blastn 90 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
4718710 4718710 PRJNA908278_P_NODE_1604_length_860_cov_3.857687_g1521_i0 PRJNA908278 1604 860 3.857687 33.1761082 Anneissia japonica 1529436 Echinodermata other_Eukaryota 63.9 4e-5   NTclustered gi|1826643236|ref|XM_033253854.1| 1529436 g1521 i0 93.023 0.0872093023255814 43 3 5 0 395 437 627 669 PREDICTED: Anneissia japonica uncharacterized LOC117110997 (LOC117110997), mRNA blastn 75 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
11093919 11093919 PRJNA908278_P_NODE_29049_length_248_cov_0.880000_g28946_i0 PRJNA908278 29049 248 0.88 2.1824 Lytechinus pictus 7653 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|2707349724|ref|XM_064115131.1| 7653 g28946 i0 100 0.120967741935484 30 0 12 0 171 200 3576 3605 PREDICTED: Lytechinus pictus galactosylceramide sulfotransferase-like (LOC129282870), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
17468581 17468581 PRJNA908278_P_NODE_28054_length_249_cov_1.312500_g27951_i0 PRJNA908278 28054 249 1.3125 3.268125 Diadema antillarum 105358 Echinodermata other_Eukaryota 128 3.64e-25   NTclustered gi|2919362806|ref|XM_071639249.1| 105358 g27951 i0 78.866 4.29317269076305 194 37 77 4 14 205 866 1057 PREDICTED: Diadema antillarum aqualysin-1-like (LOC139728297), mRNA blastn 1069 128 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;