RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA908278" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA908278 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10177661 10177661 PRJNA908278_P_NODE_24068_length_264_cov_1.476440_g23965_i0 PRJNA908278 24068 264 1.47644 3.8978016 Parvoviridae 10780 Viruses Viruses 460 3.3799999999999995e-125   NTclustered gi|2558625264|gb|OQ857567.1| 2809458 g23965 i0 100 5.65909090909091 249 0 94 0 16 264 738 986 Hepandensovirus sp. strain GS2022 non-structural protein 2 (NS2), non-structural protein 1 (NS1), and structural protein (VP) genes, complete cds blastn 1494 460 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Hepandensovirus Hepandensovirus sp.
19100561 19100561 PRJNA908278_P_NODE_30735_length_246_cov_0.890173_g30632_i0 PRJNA908278 30735 246 0.890173 2.18982558 Parvoviridae 10780 Viruses Viruses 455 1.4500000000000002e-123   NTclustered gi|2558625264|gb|OQ857567.1| 2809458 g30632 i0 100 8 246 0 100 0 1 246 3790 4035 Hepandensovirus sp. strain GS2022 non-structural protein 2 (NS2), non-structural protein 1 (NS1), and structural protein (VP) genes, complete cds blastn 1968 455 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Hepandensovirus Hepandensovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;