RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA908278" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 5 ✖

bioproject 1

  • PRJNA908278 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7268534 7268534 PRJNA908278_P_NODE_34026_length_242_cov_3.633136_g33923_i0 PRJNA908278 34026 242 3.633136 8.79218912 Hokovirus HKV1 1977638 Viruses Viruses 231 2.6099999999999996e-56   NTclustered gi|1174571674|gb|KY684104.1| 1977638 g33923 i0 84.1 137.570247933884 239 38 99 0 3 241 163444 163206 Hokovirus HKV1 isolate HKV1 clone Hokovirus_2, sequence blastn 33292 231 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
7627177 7627177 PRJNA908278_P_NODE_6826_length_451_cov_1.941799_g6723_i0 PRJNA908278 6826 451 1.941799 8.75751349 Prasinovirus 181084 Viruses Viruses 87.9 1.2e-12   NTclustered gi|2853279488|gb|PQ442268.1| 3378364 g6723 i0 100 2.00886917960089 47 0 11 0 163 209 128840 128794 Ostreococcus tauri virus 09-565, partial genome blastn 906 87.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus tauri virus 09-565
9818320 9818320 PRJNA908278_P_NODE_6108_length_474_cov_15.047382_g6005_i0 PRJNA908278 6108 474 15.047382 71.32459068 Terrestrivirus sp. 2487775 Viruses Viruses 52.8 0.046   NTclustered gi|1512471777|gb|MK071987.1| 2487775 g6005 i0 100 0.0590717299578059 28 0 6 0 207 234 37489 37462 MAG: Terrestrivirus sp. clone Terrestrivirus_9 genomic sequence blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.
11093734 11093734 PRJNA908278_P_NODE_10709_length_372_cov_1.454849_g10606_i0 PRJNA908278 10709 372 1.454849 5.41203828 Moumouvirus australiense 3080759 Viruses Viruses 62.1 5.88e-5   NTclustered gi|2500366567|ref|NC_075368.1| 2109587 g10606 i0 91.111 0.120967741935484 45 4 12 0 156 200 466992 467036 Moumouvirus australiensis isolate 10A, complete genome blastn 45 62.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus australiense
22567537 22567537 PRJNA908278_P_NODE_5878_length_484_cov_1.399027_g5775_i0 PRJNA908278 5878 484 1.399027 6.77129068 Chloriridovirus simulium1 3427924 Viruses Viruses 56.5 0.004   NTclustered gi|589287691|ref|NC_023611.1| 345585 g5775 i0 90.476 0.0867768595041322 42 4 9 0 117 158 177876 177835 Invertebrate iridescent virus 30 complete genome blastn 42 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae Chloriridovirus Chloriridovirus simulium1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;