RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA908278" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA908278 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4718736 4718736 PRJNA908278_P_NODE_18484_length_297_cov_1.468750_g18381_i0 PRJNA908278 18484 297 1.46875 4.3621875 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.008   NTclustered gi|2806450614|ref|XM_068500446.1| 1144522 g18381 i0 100 0.0976430976430976 29 0 10 0 192 220 4340 4312 Tritrichomonas foetus uncharacterized protein (TRFO_18903), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
20016947 20016947 PRJNA908278_P_NODE_35016_length_241_cov_1.273810_g34913_i0 PRJNA908278 35016 241 1.27381 3.0698821 Trimastix marina 137419 Preaxostyla other_Eukaryota 147 9.67e-31   NTclustered gi|84105352|gb|DQ295223.1| 137419 g34913 i0 80.749 77.0995850622407 187 36 78 0 26 212 117 303 Trimastix marina cytosolic heat shock protein 90 (HSP90) gene, partial cds blastn 18581 147 1 Eukaryota Metamonada   Preaxostyla     Trimastigidae Trimastix Trimastix marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;