RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA906294" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA906294 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
887116 887116 PRJNA906294_P_NODE_178321_length_277_cov_1.441176_g174205_i0 PRJNA906294 178321 277 1.441176 3.99205752 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.025   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g174205 i0 100 0.101083032490975 28 0 10 0 131 158 3647373 3647400 Anemonia sulcata genome assembly, chromosome: 14 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
12727972 12727972 PRJNA906294_P_NODE_190090_length_265_cov_1.484375_g185974_i0 PRJNA906294 190090 265 1.484375 3.93359375 Metazoa 33208 Cnidaria other_Eukaryota 200 8.17e-47   NTclustered gi|2744794010|ref|XM_012698561.3| 6087 g185974 i0 84.39 18.7358490566038 205 30 77 2 18 221 420 217 PREDICTED: Hydra vulgaris small ribosomal subunit protein uS11 (LOC100201565), transcript variant X1, mRNA blastn 4965 200 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
17465637 17465637 PRJNA906294_P_NODE_189734_length_265_cov_3.072917_g185618_i0 PRJNA906294 189734 265 3.072917 8.14323005 Anemonia sulcata 6108 Cnidaria other_Eukaryota 62.1 4.02e-5   NTclustered gi|2917940701|emb|OZ237558.1| 6108 g185618 i0 94.872 3.60754716981132 39 2 15 0 154 192 6600138 6600176 Anemonia sulcata genome assembly, chromosome: 4 blastn 956 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;