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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA906294" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA906294 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2161213 2161213 PRJNA906294_P_NODE_127502_length_348_cov_1.658182_g123386_i0 PRJNA906294 127502 348 1.658182 5.77047336 Euplotes eurystomus 5941 SAR_Eukaryotes SAR_Eukaryotes 183 1.12e-41   NTclustered gi|159037|gb|M57231.1|EUPUBQP 5941 g123386 i0 83.938 56.4425287356322 193 29 55 2 1 192 637 828 Euplotes eurystomus macronuclear polyubiquitin, complete cds blastn 19642 183 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes eurystomus
2524559 2524559 PRJNA906294_P_NODE_84222_length_473_cov_3.972500_g80108_i0 PRJNA906294 84222 473 3.9725 18.789925 Helicoprorodontidae 1607782 SAR_Eukaryotes SAR_Eukaryotes 137 1.23e-27   NTclustered gi|375305434|gb|JF975394.1| 652932 g80108 i0 90.385 25.9577167019027 104 10 22 0 298 401 309 206 Trachelotractus entzi isolate LWW07033111 28S ribosomal RNA gene, partial sequence blastn 12278 137 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida   Trachelotractus Trachelotractus entzi
3438464 3438464 PRJNA906294_P_NODE_205103_length_250_cov_23.350282_g200987_i0 PRJNA906294 205103 250 23.350282 58.375705 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 115 2.85e-21   NTclustered gi|829192014|ref|XM_012799966.1| 312017 g200987 i0 88.421 1.68 95 11 38 0 48 142 125 219 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 420 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
7263647 7263647 PRJNA906294_P_NODE_111006_length_384_cov_2.099678_g106891_i0 PRJNA906294 111006 384 2.099678 8.06276352 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 652 0   NTclustered gi|221185865|gb|FJ577812.1| 187299 g106891 i0 97.396 82.71875 384 9 100 1 1 384 902 520 Uncultured ciliate clone Ivry08 18S ribosomal RNA gene, partial sequence blastn 31764 652 1 Eukaryota Sar   Ciliophora         uncultured ciliate
8538185 8538185 PRJNA906294_P_NODE_101287_length_411_cov_7.165680_g97172_i0 PRJNA906294 101287 411 7.16568 29.4509448 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 728 0   NTclustered gi|300676714|gb|GQ377691.1| 151077 g97172 i0 98.78 51.6715328467153 410 4 99 1 3 411 450 41 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 21237 728 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8540080 8540080 PRJNA906294_P_NODE_181307_length_274_cov_1.338308_g177191_i0 PRJNA906294 181307 274 1.338308 3.66696392 Caryotricha minuta 1004043 SAR_Eukaryotes SAR_Eukaryotes 169 2.4e-37   NTclustered gi|759083508|gb|KM222125.1| 1004043 g177191 i0 86.364 20.5656934306569 154 21 56 0 119 272 1076 1229 Caryotricha minuta voucher LWW07112802 large subunit ribosomal RNA gene, partial sequence blastn 5635 169 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha minuta
11092614 11092614 PRJNA906294_P_NODE_51589_length_688_cov_2.847154_g47599_i0 PRJNA906294 51589 688 2.847154 19.58841952 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1107 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g47599 i0 96.16 44.4593023255814 677 26 98 0 12 688 699 23 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 30588 1107 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12364789 12364789 PRJNA906294_P_NODE_120510_length_362_cov_1.667820_g116395_i0 PRJNA906294 120510 362 1.66782 6.0375084 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 398 3.83e-106   NTclustered gi|110645063|gb|DQ665311.1| 151077 g116395 i0 93.609 44.5138121546961 266 17 73 0 1 266 940 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 16114 398 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16192039 16192039 PRJNA906294_P_NODE_62753_length_593_cov_4.319231_g58678_i0 PRJNA906294 62753 593 4.319231 25.61303983 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 896 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g58678 i0 93.939 67.5430016863406 594 34 100 2 1 593 18 610 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 40053 896 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
17463727 17463727 PRJNA906294_P_NODE_109214_length_389_cov_1.443038_g105099_i0 PRJNA906294 109214 389 1.443038 5.61341782 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 503 8.54e-138   NTclustered gi|300676719|gb|GQ377693.1| 151077 g105099 i0 90 8.25964010282776 390 37 100 2 1 389 623 235 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 3213 503 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
17464492 17464492 PRJNA906294_P_NODE_141994_length_323_cov_2.040000_g137878_i0 PRJNA906294 141994 323 2.04 6.5892 Stylonychia mytilus 5950 SAR_Eukaryotes SAR_Eukaryotes 198 3.68e-46   NTclustered gi|8050573|gb|AF213664.1|AF213664 5950 g137878 i0 81.25 0.792569659442725 256 38 78 9 67 317 1840 2090 Stylonychia mytilus elongation factor 2 (EF2) gene, partial cds blastn 256 198 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia mytilus
17826408 17826408 PRJNA906294_P_NODE_81314_length_486_cov_2.537530_g77202_i0 PRJNA906294 81314 486 2.53753 12.3323958 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 110 2.77e-19   NTclustered gi|342161082|gb|JF694047.1| 488251 g77202 i0 93.243 8.83539094650206 74 5 15 0 413 486 85 12 Diophryopsis hystrix isolate pop2 voucher PY20100625 28S ribosomal RNA gene, partial sequence blastn 4294 110 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Uronychiidae Diophryopsis Diophryopsis hystrix
17826446 17826446 PRJNA906294_P_NODE_91294_length_445_cov_2.193548_g87180_i0 PRJNA906294 91294 445 2.193548 9.7612886 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 800 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g87180 i0 99.101 97.4651685393258 445 4 100 0 1 445 2359 2803 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 43372 800 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20012666 20012666 PRJNA906294_P_NODE_134056_length_336_cov_1.882129_g129940_i0 PRJNA906294 134056 336 1.882129 6.32395344 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 455 2.0700000000000003e-123   NTclustered gi|10138|emb|X01746.1| 5949 g129940 i0 91.071 83.4821428571429 336 30 100 0 1 336 222 557 Stylonychia lemnae gene for alpha-tubulin blastn 28050 455 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
21289687 21289687 PRJNA906294_P_NODE_205117_length_250_cov_3.564972_g201001_i0 PRJNA906294 205117 250 3.564972 8.91243 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 446 8.89e-121   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g201001 i0 99.19 99.564 247 2 99 0 1 247 667 913 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 24891 446 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
21290859 21290859 PRJNA906294_P_NODE_48417_length_722_cov_2.741140_g44487_i0 PRJNA906294 48417 722 2.74114 19.7910308 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1059 0   NTclustered gi|110645006|gb|DQ665938.1| 151077 g44487 i0 96.984 59.3891966759003 630 19 87 0 93 722 1 630 Chilodonella uncinata actin gene, partial cds; macronuclear blastn 42879 1059 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
22562654 22562654 PRJNA906294_P_NODE_115918_length_372_cov_4.464883_g111803_i0 PRJNA906294 115918 372 4.464883 16.60936476 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 560 4.75e-155   NTclustered gi|301014695|gb|GQ377692.1| 151077 g111803 i0 93.817 68.8387096774194 372 23 100 0 1 372 393 22 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 25608 560 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
22564512 22564512 PRJNA906294_P_NODE_194918_length_260_cov_1.625668_g190802_i0 PRJNA906294 194918 260 1.625668 4.2267368 Euplotes focardii 36767 SAR_Eukaryotes SAR_Eukaryotes 202 2.2199999999999996e-47   NTclustered gi|18479018|gb|AF408404.1| 36767 g190802 i0 81.061 95.45 264 41 99 8 2 260 1395 1136 Euplotes focardii macronuclear alpha-tubulin gene, complete cds blastn 24817 202 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes focardii
23838026 23838026 PRJNA906294_P_NODE_125519_length_352_cov_1.394265_g121403_i0 PRJNA906294 125519 352 1.394265 4.9078128 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 573 5.739999999999999e-159   NTclustered gi|300521444|gb|GQ377690.1| 151077 g121403 i0 96.023 12.3778409090909 352 14 100 0 1 352 355 706 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 4357 573 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23839949 23839949 PRJNA906294_P_NODE_205919_length_250_cov_1.242938_g201803_i0 PRJNA906294 205919 250 1.242938 3.107345 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 451 1.91e-122   NTclustered gi|347439295|gb|JN111996.1| 151077 g201803 i0 99.2 98.632 250 2 100 0 1 250 64 313 Chilodonella uncinata strain USA_SC2 alpha-tubulin (atub) gene, partial cds; macronuclear blastn 24658 451 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23842128 23842128 PRJNA906294_P_NODE_92059_length_442_cov_2.769648_g87945_i0 PRJNA906294 92059 442 2.769648 12.24184416 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 737 0   NTclustered gi|301014695|gb|GQ377692.1| 151077 g87945 i0 96.825 55.1606334841629 441 14 99 0 2 442 463 23 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 24381 737 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24200513 24200513 PRJNA906294_P_NODE_93559_length_437_cov_1.568681_g89445_i0 PRJNA906294 93559 437 1.568681 6.85513597 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 294 6.35e-75   NTclustered gi|10790|emb|X12767.1| 5908 g89445 i0 79.856 87.7871853546911 417 73 95 9 21 433 965 556 Tetrahymena pyriformis alpha-tubulin gene blastn 38363 294 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
25474889 25474889 PRJNA906294_P_NODE_149540_length_312_cov_1.589958_g145424_i0 PRJNA906294 149540 312 1.589958 4.96066896 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 202 2.7399999999999997e-47   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g145424 i0 97.458 2 118 3 38 0 195 312 3082 2965 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 624 202 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;