RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA906294" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA906294 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4714178 4714178 PRJNA906294_P_NODE_117424_length_369_cov_1.462838_g113309_i0 PRJNA906294 117424 369 1.462838 5.39787222 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 682 0   NTclustered gi|197723521|gb|EF681900.2| 458884 g113309 i0 100 28.9132791327913 369 0 100 0 1 369 245 613 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 10669 682 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
24200138 24200138 PRJNA906294_P_NODE_208099_length_249_cov_0.863636_g203983_i0 PRJNA906294 208099 249 0.863636 2.15045364 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 455 1.47e-123   NTclustered gi|219524870|gb|EU709233.1| 175275 g203983 i0 99.598 100.196787148594 249 1 100 0 1 249 597 845 Uncultured cercozoan isolate HetPan13 18S ribosomal RNA gene, partial sequence blastn 24949 455 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;