RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA906294" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 6 ✖

bioproject 1

  • PRJNA906294 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2163263 2163263 PRJNA906294_P_NODE_213102_length_247_cov_0.885057_g208986_i0 PRJNA906294 213102 247 0.885057 2.18609079 Caudoviricetes sp. 2832643 Viruses Viruses 429 8.83e-116   NTclustered gi|2914832067|gb|OR222576.1| 2832643 g208986 i0 97.976 1 247 5 100 0 1 247 4568 4814 MAG: Caudoviricetes sp. isolate MSP0358 genomic sequence blastn 247 429 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5990252 5990252 PRJNA906294_P_NODE_169865_length_286_cov_2.098592_g165749_i0 PRJNA906294 169865 286 2.098592 6.00197312 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.026   NTclustered gi|2053183578|tpg|BK016306.1| 2832643 g165749 i0 100 0.0979020979020979 28 0 10 0 73 100 13202 13229 MAG TPA_asm: Caudoviricetes sp. isolate ctZ787, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5990947 5990947 PRJNA906294_P_NODE_199745_length_255_cov_2.236264_g195629_i0 PRJNA906294 199745 255 2.236264 5.7024732 Staphylococcus phage vB_SsapH-Golestan-105-M 2872011 Viruses Viruses 411 3.3199999999999995e-110   NTclustered gi|2086549864|dbj|LC648442.1| 2872011 g195629 i0 95.686 14.4862745098039 255 11 100 0 1 255 100040 99786 Staphylococcus phage vB_SsapH-Golestan-105-M DNA, complete genome blastn 3694 411 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae   Staphylococcus phage vB_SsapH-Golestan-105-M
12365306 12365306 PRJNA906294_P_NODE_142310_length_323_cov_1.212000_g138194_i0 PRJNA906294 142310 323 1.212 3.91476 Crassvirales sp. 2960088 Viruses Viruses 56.5 0.002   NTclustered gi|2053233622|tpg|BK031035.1| 2960088 g138194 i0 100 0.272445820433437 30 0 9 0 63 92 10199 10228 MAG TPA_asm: Crassvirales sp. isolate ct3DT2, partial genome blastn 88 56.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Crassvirales     Crassvirales sp.
20013817 20013817 PRJNA906294_P_NODE_182676_length_273_cov_1.020000_g178560_i0 PRJNA906294 182676 273 1.02 2.7846 Moovirus moo 3060392 Viruses Viruses 499 7.45e-137   NTclustered gi|2438080420|ref|NC_070850.1| 2886042 g178560 i0 99.634 1 273 1 100 0 1 273 2637 2909 Shigella virus Moo19, complete genome blastn 273 499 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Schitoviridae Moovirus Moovirus moo
25116147 25116147 PRJNA906294_S_NODE_1160_length_253_cov_1.538889_g1159_i0 PRJNA906294 1160 253 1.538889 3.89338917 Caudoviricetes sp. 2832643 Viruses Viruses 58.4 4.93e-4   NTclustered gi|2056923661|tpg|BK054360.1| 2832643 g1159 i0 97.143 1.71146245059289 35 0 14 1 1 35 33736 33703 MAG TPA_asm: Caudoviricetes sp. isolate ctUKC3, partial genome blastn 433 58.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;