RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA904835" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA904835 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
882982 882982 PRJNA904835_P_NODE_31501_length_348_cov_1.516364_g31245_i0 PRJNA904835 31501 348 1.516364 5.27694672 Azumapecten farreri 106299 Mollusca Mollusca 638 1.99e-178   NTclustered gi|219809072|gb|FJ595957.1| 106299 g31245 i0 99.713 3 348 1 100 0 1 348 11982 12329 Chlamys farreri mitochondrion, partial genome blastn 1044 638 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Azumapecten Azumapecten farreri
2158307 2158307 PRJNA904835_P_NODE_31582_length_348_cov_1.043636_g31326_i0 PRJNA904835 31582 348 1.043636 3.63185328 Azumapecten farreri 106299 Mollusca Mollusca 638 1.99e-178   NTclustered gi|2088231997|ref|NC_056656.1| 106299 g31326 i0 99.713 35.5862068965517 348 1 100 0 1 348 1106 1453 Chlamys farreri mitochondrion, complete genome blastn 12384 638 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Azumapecten Azumapecten farreri
2158636 2158636 PRJNA904835_P_NODE_42142_length_289_cov_1.240741_g41886_i0 PRJNA904835 42142 289 1.240741 3.58574149 Mizuhopecten yessoensis 6573 Mollusca Mollusca 374 5.029999999999998e-99   NTclustered gi|1207905245|ref|XM_021486227.1| 6573 g41886 i0 96.46 35.8685121107266 226 8 99 0 64 289 420 195 PREDICTED: Mizuhopecten yessoensis 40S ribosomal protein S18 (LOC110442533), mRNA blastn 10366 374 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
3434185 3434185 PRJNA904835_P_NODE_50703_length_251_cov_0.865169_g50447_i0 PRJNA904835 50703 251 0.865169 2.17157419 Azumapecten farreri 106299 Mollusca Mollusca 425 1.16e-114   NTclustered gi|2088231997|ref|NC_056656.1| 106299 g50447 i0 97.211 13.0119521912351 251 7 100 0 1 251 18782 18532 Chlamys farreri mitochondrion, complete genome blastn 3266 425 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Azumapecten Azumapecten farreri
8536459 8536459 PRJNA904835_P_NODE_51227_length_250_cov_1.305085_g50971_i0 PRJNA904835 51227 250 1.305085 3.2627125 Sepia officinalis 6610 Mollusca Mollusca 121 6.12e-23   NTclustered gi|385145403|emb|HE687189.1| 6610 g50971 i0 80.625 19.924 160 27 63 3 29 186 1287 1130 Sepia officinalis mRNA for actin II (gene ACTII) blastn 4981 121 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Sepia Sepia officinalis
11085990 11085990 PRJNA904835_P_NODE_1269_length_1679_cov_2.519925_g1206_i0 PRJNA904835 1269 1679 2.519925 42.30954075 Azumapecten farreri 106299 Mollusca Mollusca 3088 0   NTclustered gi|219809072|gb|FJ595957.1| 106299 g1206 i0 99.881 46.9279332936272 1679 1 100 1 1 1679 1507 3184 Chlamys farreri mitochondrion, partial genome blastn 78792 3088 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Azumapecten Azumapecten farreri
12361975 12361975 PRJNA904835_P_NODE_34050_length_332_cov_1.552124_g33794_i0 PRJNA904835 34050 332 1.552124 5.15305168 Azumapecten farreri 106299 Mollusca Mollusca 595 1.1499999999999998e-165   NTclustered gi|2088231997|ref|NC_056656.1| 106299 g33794 i0 99.094 2.99096385542169 331 3 99 0 1 331 7784 7454 Chlamys farreri mitochondrion, complete genome blastn 993 595 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Azumapecten Azumapecten farreri
13636439 13636439 PRJNA904835_P_NODE_24551_length_402_cov_1.623100_g24296_i0 PRJNA904835 24551 402 1.6231 6.524862 Mytilus californianus 6549 Mollusca Mollusca 56.5 0.003   NTclustered gi|2334759951|ref|XM_052208961.1| 6549 g24296 i0 96.97 0.164179104477612 33 1 8 0 80 112 2693 2725 PREDICTED: Mytilus californianus uncharacterized LOC127704763 (LOC127704763), transcript variant X1, mRNA blastn 66 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
14910871 14910871 PRJNA904835_P_NODE_31632_length_347_cov_1.934307_g31376_i0 PRJNA904835 31632 347 1.934307 6.71204529 Dreissena polymorpha 45954 Mollusca Mollusca 54.7 0.009   NTclustered gi|2364377716|ref|XM_052399575.1| 45954 g31376 i0 96.875 0.276657060518732 32 1 9 0 69 100 4695 4664 PREDICTED: Dreissena polymorpha protein timeless homolog (LOC127861177), transcript variant X1, mRNA blastn 96 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
18734144 18734144 PRJNA904835_P_NODE_21595_length_432_cov_1.286908_g21340_i0 PRJNA904835 21595 432 1.286908 5.55944256 Azumapecten farreri 106299 Mollusca Mollusca 776 0   NTclustered gi|2088231997|ref|NC_056656.1| 106299 g21340 i0 99.074 39.6643518518519 432 4 100 0 1 432 520 89 Chlamys farreri mitochondrion, complete genome blastn 17135 776 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Azumapecten Azumapecten farreri
21649463 21649463 PRJNA904835_P_NODE_28297_length_371_cov_1.124161_g28041_i0 PRJNA904835 28297 371 1.124161 4.17063731 Pectinidae 6566 Mollusca Mollusca 667 0   NTclustered gi|2872598859|gb|PQ799200.1| 6570 g28041 i0 99.189 52.9029649595687 370 3 99 0 1 370 633 1002 Chlamys nipponensis isolate CHNCF2 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 19627 667 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Chlamys Chlamys nipponensis
22559539 22559539 PRJNA904835_P_NODE_20298_length_448_cov_2.205333_g20043_i0 PRJNA904835 20298 448 2.205333 9.87989184 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.043   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g20043 i0 100 0.0625 28 0 6 0 294 321 25718586 25718559 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23834789 23834789 PRJNA904835_P_NODE_22299_length_424_cov_2.193732_g22044_i0 PRJNA904835 22299 424 2.193732 9.30142368 Littorina saxatilis 31220 Mollusca Mollusca 154 1.09e-32   NTclustered gi|2868659100|ref|XM_070332305.1| 31220 g22044 i0 75.853 16.9150943396226 381 49 87 22 1 351 5874 6241 PREDICTED: Littorina saxatilis obscurin-like (LOC138960402), transcript variant X2, mRNA blastn 7172 154 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;