RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA904835" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA904835 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5986897 5986897 PRJNA904835_P_NODE_52245_length_249_cov_0.875000_g51989_i0 PRJNA904835 52245 249 0.875 2.17875 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2917940731|emb|OZ237564.1| 6108 g51989 i0 100 1.46987951807229 29 0 12 0 191 219 7072742 7072714 Anemonia sulcata genome assembly, chromosome: 10 blastn 366 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
10176067 10176067 PRJNA904835_P_NODE_54848_length_246_cov_0.890173_g54592_i0 PRJNA904835 54848 246 0.890173 2.18982558 Metazoa 33208 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2917940756|emb|OZ237571.1| 6108 g54592 i0 100 1.82113821138211 28 0 11 0 81 108 11836762 11836789 Anemonia sulcata genome assembly, chromosome: 17 blastn 448 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
18735243 18735243 PRJNA904835_P_NODE_58875_length_241_cov_0.916667_g58619_i0 PRJNA904835 58875 241 0.916667 2.20916747 Eunicella cavolini 317547 Cnidaria other_Eukaryota 58.4 4.66e-4   NTclustered gi|2918369538|emb|OZ237720.1| 317547 g58619 i0 97.143 2.76763485477178 35 0 14 1 196 229 29870878 29870844 Eunicella cavolini genome assembly, chromosome: 4 blastn 667 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;