RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA902848" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA902848 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3432725 3432725 PRJNA902848_P_NODE_2623_length_471_cov_1.007538_g2573_i0 PRJNA902848 2623 471 1.007538 4.74550398 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 499 1.3599999999999999e-136   NTclustered gi|402761759|gb|JX184011.1| 104788 g2573 i0 85.775 30.9808917197452 471 67 100 0 1 471 579 109 Macrotrachela quadricornifera isolate MQ cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 14592 499 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
5985476 5985476 PRJNA902848_P_NODE_705_length_766_cov_11.473304_g662_i0 PRJNA902848 705 766 11.473304 87.88550864 Philodina roseola 96448 Rotifera other_Eukaryota 1310 0   NTclustered gi|37785582|gb|AY210469.1| 96448 g662 i0 97.523 92.1971279373368 767 18 100 1 1 766 376 1142 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 70623 1310 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
9809933 9809933 PRJNA902848_P_NODE_20568_length_229_cov_6.730769_g20518_i0 PRJNA902848 20568 229 6.730769 15.41346101 Philodina roseola 96448 Rotifera other_Eukaryota 385 1.77e-102   NTclustered gi|37785582|gb|AY210469.1| 96448 g20518 i0 96.943 83.5982532751092 229 7 100 0 1 229 57 285 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 19144 385 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
13635877 13635877 PRJNA902848_P_NODE_7411_length_321_cov_1.649194_g7361_i0 PRJNA902848 7411 321 1.649194 5.29391274 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 267 9.88e-67   NTclustered gi|402761729|gb|JX183996.1| 104788 g7361 i0 81.734 2.42679127725857 323 55 100 3 1 321 456 136 Macrotrachela quadricornifera isolate CR ATP synthase F0 subunit 6 (ATP6) gene, partial cds; mitochondrial blastn 779 267 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
13635891 13635891 PRJNA902848_P_NODE_791_length_732_cov_11.738998_g747_i0 PRJNA902848 791 732 11.738998 85.92946536 Philodina citrina 468664 Rotifera other_Eukaryota 723 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g747 i0 84.885 21.3087431693989 741 85 99 22 2 732 2392 1669 Philodina citrina complete mitochondrial genome blastn 15598 723 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
17824644 17824644 PRJNA902848_P_NODE_8694_length_302_cov_1.218341_g8644_i0 PRJNA902848 8694 302 1.218341 3.67938982 Ploima 84394 Rotifera other_Eukaryota 287 7.08e-73   NTclustered gi|1189131121|dbj|LC215601.1| 1957054 g8644 i0 83.946 98.6523178807947 299 48 99 0 1 299 323 621 Trichocerca sp. WM-2017a mitochondrial COI gene for cytochrome c oxidase subunit I, partial cds, isolate: Tricho_012 blastn 29793 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Trichocercidae Trichocerca Trichocerca sp. WM-2017a
22924580 22924580 PRJNA902848_P_NODE_11998_length_262_cov_6.137566_g11948_i0 PRJNA902848 11998 262 6.137566 16.08042292 Metazoa 33208 Rotifera other_Eukaryota 484 1.99e-132   NTclustered gi|37785582|gb|AY210469.1| 96448 g11948 i0 100 99.9160305343512 262 0 100 0 1 262 1451 1190 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 26178 484 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;