RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA902848" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA902848 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1247117 1247117 PRJNA902848_P_NODE_7061_length_327_cov_3.224409_g7011_i0 PRJNA902848 7061 327 3.224409 10.54381743 Entosiphon 101492 Euglenozoa other_Eukaryota 599 8.759999999999997e-167   NTclustered gi|41400272|gb|AY425008.1| 259048 g7011 i0 99.695 5.51376146788991 328 0 100 1 1 327 1607 1934 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 1803 604 0.991721854304636 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003
3432847 3432847 PRJNA902848_P_NODE_7623_length_318_cov_0.955102_g7573_i0 PRJNA902848 7623 318 0.955102 3.03722436 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 195 4.68e-45   NTclustered gi|25986822|gb|AY122625.1| 127150 g7573 i0 81.526 4.25157232704403 249 35 77 10 4 247 853 611 Rhynchomonas nasuta strain CBR1 heat shock protein 90 (HSP-90) gene, partial cds blastn 1352 195 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
4710682 4710682 PRJNA902848_P_NODE_4224_length_395_cov_1.670807_g4174_i0 PRJNA902848 4224 395 1.670807 6.59968765 Entosiphon oblongus 1732444 Euglenozoa other_Eukaryota 730 0   NTclustered gi|937541988|gb|KP306754.1| 1732444 g4174 i0 100 6.76708860759494 395 0 100 0 1 395 1095 701 Entosiphon oblongum strain CCAP 1220/2 18S ribosomal RNA gene, partial sequence blastn 2673 730 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon oblongus
5075074 5075074 PRJNA902848_P_NODE_13484_length_252_cov_2.178771_g13434_i0 PRJNA902848 13484 252 2.178771 5.49050292 Bodo 5712 Euglenozoa other_Eukaryota 451 1.93e-122   NTclustered gi|20331094|gb|AY028452.1| 75058 g13434 i0 99.2 91.0714285714286 250 2 99 0 1 250 1001 1250 Bodo saltans 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 22950 451 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
7624994 7624994 PRJNA902848_P_NODE_12766_length_254_cov_3.988950_g12716_i0 PRJNA902848 12766 254 3.98895 10.131933 Leishmania 5658 Euglenozoa other_Eukaryota 106 1.75e-18   NTclustered gi|440222433|gb|JX030101.1| 5660 g12716 i0 74.906 87.2362204724409 267 50 100 13 1 254 368 106 Leishmania braziliensis isolate LbrET.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 22158 106 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
11085564 11085564 PRJNA902848_P_NODE_15689_length_249_cov_0.886364_g15639_i0 PRJNA902848 15689 249 0.886364 2.20704636 Entosiphon oblongus 1732444 Euglenozoa other_Eukaryota 460 3.16e-125   NTclustered gi|937541988|gb|KP306754.1| 1732444 g15639 i0 100 61.995983935743 249 0 100 0 1 249 573 325 Entosiphon oblongum strain CCAP 1220/2 18S ribosomal RNA gene, partial sequence blastn 15437 460 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon oblongus
21283818 21283818 PRJNA902848_P_NODE_11677_length_266_cov_1.378238_g11627_i0 PRJNA902848 11677 266 1.378238 3.66611308 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 481 2.62e-131   NTclustered gi|1996609220|gb|MW694339.1| 127150 g11627 i0 99.248 98.8571428571429 266 2 100 0 1 266 1359 1094 Rhynchomonas nasuta isolate G431 small subunit ribosomal RNA gene, partial sequence blastn 26296 481 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;