RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA902848" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA902848 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7260232 7260232 PRJNA902848_P_NODE_6146_length_344_cov_6.690037_g6096_i0 PRJNA902848 6146 344 6.690037 23.01372728 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.009   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g6096 i0 96.97 0.0959302325581395 33 0 9 1 214 245 6800800 6800832 Anemonia sulcata genome assembly, chromosome: 14 blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
14910103 14910103 PRJNA902848_P_NODE_7812_length_314_cov_1.775934_g7762_i0 PRJNA902848 7812 314 1.775934 5.57643276 Nematostella vectensis 45351 Cnidaria other_Eukaryota 276 1.6e-69   NTclustered gi|2257870126|ref|XM_032363373.2| 45351 g7762 i0 86.454 24.531847133758 251 34 80 0 12 262 379 129 PREDICTED: Nematostella vectensis calmodulin (LOC5518649), mRNA blastn 7703 276 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
25107949 25107949 PRJNA902848_P_NODE_14640_length_251_cov_0.876404_g14590_i0 PRJNA902848 14640 251 0.876404 2.19977404 Bonneviella sp. 4 839AS 314577 Cnidaria other_Eukaryota 211 3.55e-50   NTclustered gi|62825425|gb|AY789849.1| 314577 g14590 i0 89.697 30 165 17 66 0 1 165 165 1 Bonneviella sp. 4 839AS calmodulin gene, partial cds blastn 7530 211 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Campanulariidae Bonneviella Bonneviella sp. 4 839AS

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;