RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA902848" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA902848 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2157349 2157349 PRJNA902848_P_NODE_1762_length_546_cov_1.928118_g1713_i0 PRJNA902848 1762 546 1.928118 10.52752428 Ralstonia phage RSCq 3053862 Viruses Viruses 1003 0   NTclustered gi|2533210286|gb|OR088903.1| 3053862 g1713 i0 99.817 23.4139194139194 546 1 100 0 1 546 3995 3450 Ralstonia phage RSCq, complete genome blastn 12784 1003 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Ralstonia phage RSCq
3798985 3798985 PRJNA902848_P_NODE_16463_length_248_cov_0.891429_g16413_i0 PRJNA902848 16463 248 0.891429 2.21074392 Restivirus 2732877 Viruses Viruses 453 5.2600000000000005e-123   NTclustered gi|2046361450|ref|NC_055054.1| 1497850 g16413 i0 99.597 24.3790322580645 248 1 100 0 1 248 5665 5912 Ralstonia phage RS611 DNA, complete genome blastn 6046 453 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Restivirus Restivirus RSS1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;