RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA902848" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 5 ✖

bioproject 1

  • PRJNA902848 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1246963 1246963 PRJNA902848_P_NODE_15521_length_249_cov_0.886364_g15471_i0 PRJNA902848 15521 249 0.886364 2.20704636 Methanothrix 2222 Archaea Archaea 460 3.16e-125   NTclustered gi|2133328945|gb|CP086219.1| 90426 g15471 i0 100 2 249 0 100 0 1 249 582306 582554 MAG: Methanothrix sp. isolate MAG 281 chromosome blastn 498 460 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
7260066 7260066 PRJNA902848_P_NODE_17666_length_246_cov_0.901734_g17616_i0 PRJNA902848 17666 246 0.901734 2.21826564 Methanosarcina hadiensis 3078083 Archaea Archaea 187 5.839999999999998e-43   NTclustered gi|2878048566|gb|CP136241.1| 3078083 g17616 i0 81.466 11.1951219512195 232 39 94 4 8 238 3288533 3288305 Methanosarcina hadiensis strain TD41E1-1 chromosome, complete genome blastn 2754 187 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina hadiensis
10175584 10175584 PRJNA902848_P_NODE_19428_length_243_cov_0.917647_g19378_i0 PRJNA902848 19428 243 0.917647 2.22988221 Methanothrix 2222 Archaea Archaea 388 1.47e-103   NTclustered gi|2133328945|gb|CP086219.1| 90426 g19378 i0 95.492 2.0082304526749 244 9 100 2 1 243 1800724 1800482 MAG: Methanothrix sp. isolate MAG 281 chromosome blastn 488 388 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
11450667 11450667 PRJNA902848_P_NODE_12369_length_259_cov_1.306452_g12319_i0 PRJNA902848 12369 259 1.306452 3.38371068 Natronomonadaceae 3402413 Archaea Archaea 211 3.68e-50   NTclustered gi|1865519430|gb|CP058335.1| 1710540 g12319 i0 81.712 104.907335907336 257 43 98 4 1 255 1513402 1513148 Natronomonas salina strain YPL13 chromosome, complete genome blastn 27171 211 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas salina
21284168 21284168 PRJNA902848_P_NODE_9377_length_292_cov_1.351598_g9327_i0 PRJNA902848 9377 292 1.351598 3.94666616 Methanospirillum hungatei 2203 Archaea Archaea 303 6.77e-78   NTclustered gi|88186784|gb|CP000254.1| 323259 g9327 i0 86.765 0.931506849315068 272 36 93 0 21 292 534594 534865 Methanospirillum hungatei JF-1, complete genome blastn 272 303 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum hungatei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;