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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA902848" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 19 ✖

bioproject 1

  • PRJNA902848 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
882084 882084 PRJNA902848_P_NODE_20541_length_233_cov_2.237500_g20491_i0 PRJNA902848 20541 233 2.2375 5.213375 Synura synuroidea 47573 SAR_Eukaryotes SAR_Eukaryotes 187 5.48e-43   NTclustered gi|11466457|ref|NC_002174.1| 47573 g20491 i0 83.495 1.27038626609442 206 29 87 4 32 233 1175 971 Chrysodidymus synuroideus mitochondrion, complete genome blastn 296 187 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura synuroidea
1247019 1247019 PRJNA902848_P_NODE_20641_length_211_cov_11.427536_g20591_i0 PRJNA902848 20641 211 11.427536 24.11210096 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 390 3.459999999999999e-104   NTclustered gi|2065561668|gb|MZ540265.1| 44029 g20591 i0 100 100.004739336493 211 0 100 0 1 211 1367 1577 Paramecium jenningsi isolate UR02 small subunit ribosomal RNA gene, partial sequence blastn 21101 390 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium jenningsi
5075149 5075149 PRJNA902848_P_NODE_20664_length_200_cov_13.535433_g20614_i0 PRJNA902848 20664 200 13.535433 27.070866 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 370 4.22e-98   NTclustered gi|1802599794|gb|MT001203.1| 41631 g20614 i0 100 100.075 200 0 100 0 1 200 1563 1364 Colpoda sp. strain HFCC848 small subunit ribosomal RNA gene, partial sequence blastn 20015 370 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
5985327 5985327 PRJNA902848_P_NODE_19345_length_243_cov_0.917647_g19295_i0 PRJNA902848 19345 243 0.917647 2.22988221 Symbiodinium kawagutii 104179 SAR_Eukaryotes SAR_Eukaryotes 444 3.09e-120   NTclustered gi|512786524|gb|KC943146.1| 104179 g19295 i0 99.588 3.51440329218107 243 1 100 0 1 243 58 300 Symbiodinium kawagutii strain CCMP2468 clone SymkaFL1061064220497(5'-), partial sequence blastn 854 444 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium kawagutii
5985500 5985500 PRJNA902848_P_NODE_7925_length_312_cov_9.635983_g7875_i0 PRJNA902848 7925 312 9.635983 30.06426696 Frontonia canadensis 1590099 SAR_Eukaryotes SAR_Eukaryotes 370 7.09e-98   NTclustered gi|742270343|gb|KJ475286.1| 1590099 g7875 i0 88.141 100.173076923077 312 35 100 2 1 312 883 1192 Frontonia canadensis isolate S21L large subunit ribosomal RNA gene, partial sequence blastn 31254 370 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Frontoniidae Frontonia Frontonia canadensis
5985518 5985518 PRJNA902848_P_NODE_8725_length_301_cov_4.350877_g8675_i0 PRJNA902848 8725 301 4.350877 13.09613977 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 444 3.9599999999999996e-120   NTclustered gi|512134943|gb|JX178902.1| 1295638 g8675 i0 93.355 90.6644518272425 301 19 100 1 1 301 1633 1334 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 27290 444 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
7260323 7260323 PRJNA902848_P_NODE_9706_length_288_cov_2.827907_g9656_i0 PRJNA902848 9706 288 2.827907 8.14437216 Conchophthirus curtus 2675438 SAR_Eukaryotes SAR_Eukaryotes 189 1.95e-43   NTclustered gi|2518630383|gb|OR129888.1| 2675438 g9656 i0 80.153 12.2013888888889 262 45 90 7 1 259 1159 902 Conchophthirus curtus isolate HO 30 UC internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3514 189 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Conchophthiridae Conchophthirus Conchophthirus curtus
9809784 9809784 PRJNA902848_P_NODE_13208_length_253_cov_0.866667_g13158_i0 PRJNA902848 13208 253 0.866667 2.19266751 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2794946118|ref|XM_067860381.1| 5871 g13158 i0 100 0.229249011857708 29 0 11 0 102 130 4213 4185 Babesia caballi heat shock protein DNAJ pfj4, putative (BcabD6B2_38480), partial mRNA blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
10175664 10175664 PRJNA902848_P_NODE_5208_length_365_cov_12.301370_g5158_i0 PRJNA902848 5208 365 12.30137 44.9000005 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 675 0   NTclustered gi|82470179|gb|DQ244022.1| 175274 g5158 i0 100 95.345205479452 365 0 100 0 1 365 10 374 Uncultured alveolate clone PAB6AU2004 18S ribosomal RNA gene, partial sequence blastn 34801 675 1 Eukaryota Sar             uncultured alveolate
11085760 11085760 PRJNA902848_P_NODE_5249_length_365_cov_0.955479_g5199_i0 PRJNA902848 5249 365 0.955479 3.48749835 Lecythium sp. 3678_261K 238773 SAR_Eukaryotes SAR_Eukaryotes 523 6.109999999999999e-144   NTclustered gi|33089893|gb|AY283756.1| 238773 g5199 i0 92.582 98.1917808219178 364 27 99 0 1 364 590 227 Lecythium sp. 3678_261K actin gene, partial cds blastn 35840 523 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium sp. 3678_261K
11085805 11085805 PRJNA902848_P_NODE_6949_length_330_cov_0.906615_g6899_i0 PRJNA902848 6949 330 0.906615 2.9918295 Synura synuroidea 47573 SAR_Eukaryotes SAR_Eukaryotes 239 2.22e-58   NTclustered gi|11466457|ref|NC_002174.1| 47573 g6899 i0 81.757 61.7212121212121 296 45 88 9 1 292 575 865 Chrysodidymus synuroideus mitochondrion, complete genome blastn 20368 239 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura synuroidea
14001094 14001094 PRJNA902848_P_NODE_8251_length_308_cov_1.136170_g8201_i0 PRJNA902848 8251 308 1.13617 3.4994036 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 564 2.99e-156   NTclustered gi|363412153|gb|JN120227.1| 60850 g8201 i0 99.675 99.0064935064935 308 1 100 0 1 308 512 819 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 30494 564 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
16184874 16184874 PRJNA902848_P_NODE_2993_length_449_cov_8.085106_g2943_i0 PRJNA902848 2993 449 8.085106 36.30212594 Cardiostomatella vermiformis 311390 SAR_Eukaryotes SAR_Eukaryotes 507 7.72e-139   NTclustered gi|404425895|gb|JX310024.1| 311390 g2943 i0 89.021 93.5523385300668 419 33 92 11 1 413 2020 2431 Cardiostomatella vermiformis voucher FXP2007101002 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 42005 507 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Loxocephalidae Cardiostomatella Cardiostomatella vermiformis
17824532 17824532 PRJNA902848_P_NODE_20654_length_205_cov_15.371212_g20604_i0 PRJNA902848 20654 205 15.371212 31.5109846 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 377 2.6e-100   NTclustered gi|291495599|gb|GU823226.1| 152704 g20604 i0 100 99.5121951219512 204 0 99 0 1 204 857 1060 Uncultured stramenopile clone BCA5F13RJ3F09 18S ribosomal RNA gene, partial sequence blastn 20400 377 1 Eukaryota Sar             uncultured stramenopile
20008616 20008616 PRJNA902848_P_NODE_18276_length_245_cov_0.906977_g18226_i0 PRJNA902848 18276 245 0.906977 2.22209365 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 200 7.46e-47   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g18226 i0 82.449 25.7142857142857 245 28 99 11 2 243 3777 4009 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 6300 200 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
20008853 20008853 PRJNA902848_P_NODE_996_length_672_cov_8.966611_g949_i0 PRJNA902848 996 672 8.966611 60.25562592 Frontonia paramagna 1590102 SAR_Eukaryotes SAR_Eukaryotes 518 5.49e-142   NTclustered gi|1908106363|gb|MW031798.1| 1590102 g949 i0 89.423 87.9136904761905 416 37 91 7 223 638 1435 1843 Frontonia paramagna isolate SM2017091201 large subunit ribosomal RNA gene, partial sequence blastn 59078 518 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Frontoniidae Frontonia Frontonia paramagna
20373322 20373322 PRJNA902848_P_NODE_2016_length_518_cov_7.649438_g1967_i0 PRJNA902848 2016 518 7.649438 39.62408884 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 953 0   NTclustered gi|1802599797|gb|MT001206.1| 41631 g1967 i0 100 99.6216216216216 516 0 99 0 1 516 509 1024 Colpoda sp. strain HFCC1227 small subunit ribosomal RNA gene, partial sequence blastn 51604 953 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
23833987 23833987 PRJNA902848_P_NODE_11639_length_267_cov_0.891753_g11589_i0 PRJNA902848 11639 267 0.891753 2.38098051 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 320 6.07e-83   NTclustered gi|238617604|gb|FJ973379.1| 646463 g11589 i0 89.535 87.1198501872659 258 20 96 5 12 267 715 967 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 23261 320 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
25108151 25108151 PRJNA902848_P_NODE_540_length_847_cov_10.018088_g498_i0 PRJNA902848 540 847 10.018088 84.85320536 Ochromonas sp. SAG 933.10 984272 SAR_Eukaryotes SAR_Eukaryotes 1330 0   NTclustered gi|323690578|gb|GU935637.1| 984272 g498 i0 95.065 86.2290436835891 851 33 99 7 1 846 1160 2006 Ochromonas sp. SAG 933.10 28S ribosomal RNA gene, partial sequence blastn 73036 1330 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas sp. SAG 933.10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;