RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA900999" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 8 ✖

bioproject 1

  • PRJNA900999 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4706699 4706699 PRJNA900999_S_NODE_2084_length_270_cov_292674.510373_g2028_i0 PRJNA900999 2084 270 292674.510373 790221.1780071 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 4.11e-5   NTclustered gi|2915033806|gb|OR222676.1| 2832643 g2028 i0 95 18.4259259259259 40 0 14 2 232 270 100125 100087 MAG: Caudoviricetes sp. isolate MSP0253 genomic sequence blastn 4975 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
16180836 16180836 PRJNA900999_S_NODE_6653_length_175_cov_4.315068_g6597_i0 PRJNA900999 6653 175 4.315068 7.551369 Caudoviricetes sp. 2832643 Viruses Viruses 217 4.94e-52   NTclustered gi|2914826682|gb|OR222326.1| 2832643 g6597 i0 94.326 24.6342857142857 141 8 81 0 12 152 49563 49703 MAG: Caudoviricetes sp. isolate MSP1075 genomic sequence blastn 4311 217 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17456321 17456321 PRJNA900999_S_NODE_3194_length_232_cov_5.315271_g3138_i0 PRJNA900999 3194 232 5.315271 12.33142872 uncultured human fecal virus 239364 Viruses Viruses 429 8.2e-116   NTclustered gi|1569729598|gb|MK233924.1| 239364 g3138 i0 100 249.068965517241 232 0 100 0 1 232 1288 1057 Uncultured human fecal virus clone R.bromii_S11.J19_2_c1 sequence blastn 57784 429 1 Viruses               uncultured human fecal virus
17456339 17456339 PRJNA900999_S_NODE_4454_length_204_cov_34.440000_g4398_i0 PRJNA900999 4454 204 34.44 70.2576 Rheavirus sinusmexicani 3047716 Viruses Viruses 52.8 0.018   NTclustered gi|310830989|ref|NC_014637.1| 693272 g4398 i0 100 0.137254901960784 28 0 14 0 100 127 471409 471436 Cafeteria roenbergensis virus BV-PW1, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Rheavirus Rheavirus sinusmexicani
17823515 17823515 PRJNA900999_S_NODE_634_length_395_cov_8.956284_g579_i0 PRJNA900999 634 395 8.956284 35.3773218 Viruses 10239 Viruses Viruses 122 2.84e-23   NTclustered gi|2320152903|gb|ON746353.1| 2972063 g579 i0 81.013 1.13924050632911 158 27 40 3 120 277 2394 2240 MAG: Hulunbuir Botou tick virus 4 isolate TIGMIC 2 genomic sequence blastn 450 122 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Hulunbuir Botou tick virus 4
18729461 18729461 PRJNA900999_S_NODE_1135_length_328_cov_239747.769231_g1079_i0 PRJNA900999 1135 328 239747.769231 786372.68307768 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 5.13e-5   NTclustered gi|2915033806|gb|OR222676.1| 2832643 g1079 i0 95 16.0914634146341 40 0 12 2 1 39 100087 100125 MAG: Caudoviricetes sp. isolate MSP0253 genomic sequence blastn 5278 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20004678 20004678 PRJNA900999_S_NODE_1796_length_284_cov_277038.768627_g1740_i0 PRJNA900999 1796 284 277038.768627 786790.10290068 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 4.36e-5   NTclustered gi|2915033806|gb|OR222676.1| 2832643 g1740 i0 95 17.6197183098592 40 0 14 2 1 39 100087 100125 MAG: Caudoviricetes sp. isolate MSP0253 genomic sequence blastn 5004 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
25104111 25104111 PRJNA900999_S_NODE_4780_length_199_cov_5.776471_g4724_i0 PRJNA900999 4780 199 5.776471 11.49517729 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.005   NTclustered gi|2309594316|gb|OP536747.1| 10244 g4724 i0 100 14.572864321608 29 0 15 0 104 132 119274 119302 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;