contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA900028" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 875936 | 875936 | PRJNA900028_P_NODE_7201_length_402_cov_3.025496_g6456_i0 | PRJNA900028 | 7201 | 402 | 3.025496 | 12.16249392 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 390 | 7.189999999999999e-104 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g6456 | i0 | 84.352 | 100.31592039801 | 409 | 53 | 100 | 8 | 1 | 402 | 1103316 | 1102912 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 40327 | 390 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 3425192 | 3425192 | PRJNA900028_P_NODE_113323_length_169_cov_1.700000_g112574_i0 | PRJNA900028 | 113323 | 169 | 1.7 | 2.873 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 150 | 4.86e-32 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g112574 | i0 | 85.616 | 27.3431952662722 | 146 | 17 | 85 | 3 | 2 | 145 | 749690 | 749547 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 4621 | 150 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 3425737 | 3425737 | PRJNA900028_P_NODE_170423_length_163_cov_0.894737_g169674_i0 | PRJNA900028 | 170423 | 163 | 0.894737 | 1.45842131 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 60.2 | 8.12e-5 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g169674 | i0 | 92.683 | 0.809815950920245 | 41 | 3 | 25 | 0 | 53 | 93 | 1126595 | 1126555 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 132 | 60.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 3426261 | 3426261 | PRJNA900028_P_NODE_39283_length_222_cov_1.179191_g38534_i0 | PRJNA900028 | 39283 | 222 | 1.179191 | 2.61780402 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 219 | 1.83e-52 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g38534 | i0 | 85.135 | 82.0135135135135 | 222 | 24 | 98 | 8 | 3 | 219 | 3042609 | 3042392 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 18207 | 219 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 3426728 | 3426728 | PRJNA900028_P_NODE_783_length_1530_cov_3.674544_g397_i0 | PRJNA900028 | 783 | 1530 | 3.674544 | 56.2205232 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 2084 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g397 | i0 | 91.347 | 306.165359477124 | 1537 | 114 | 99 | 17 | 5 | 1530 | 3043861 | 3042333 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 468433 | 2084 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 9803434 | 9803434 | PRJNA900028_P_NODE_4188_length_524_cov_1.566316_g3463_i0 | PRJNA900028 | 4188 | 524 | 1.566316 | 8.20749584 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 523 | 9.059999999999997e-144 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g3463 | i0 | 84.934 | 45.9503816793893 | 531 | 65 | 100 | 15 | 1 | 524 | 421902 | 422424 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 24078 | 523 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16177702 | 16177702 | PRJNA900028_P_NODE_173433_length_163_cov_0.894737_g172684_i0 | PRJNA900028 | 173433 | 163 | 0.894737 | 1.45842131 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 158 | 2.8e-34 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g172684 | i0 | 85.161 | 78.7423312883436 | 155 | 21 | 94 | 2 | 1 | 154 | 197945 | 198098 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 12835 | 158 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17453119 | 17453119 | PRJNA900028_P_NODE_165614_length_163_cov_1.324561_g164865_i0 | PRJNA900028 | 165614 | 163 | 1.324561 | 2.15903443 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 191 | 2.76e-44 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g164865 | i0 | 89.241 | 71.0490797546012 | 158 | 10 | 94 | 4 | 1 | 154 | 3042777 | 3042623 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 11581 | 191 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 18727305 | 18727305 | PRJNA900028_P_NODE_67535_length_190_cov_1.446809_g66786_i0 | PRJNA900028 | 67535 | 190 | 1.446809 | 2.7489371 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 237 | 4.2e-58 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g66786 | i0 | 89.84 | 9.47894736842105 | 187 | 16 | 97 | 3 | 1 | 185 | 1102850 | 1103035 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 1801 | 237 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 20371366 | 20371366 | PRJNA900028_P_NODE_197316_length_161_cov_0.910714_g196567_i0 | PRJNA900028 | 197316 | 161 | 0.910714 | 1.46624954 | FCB group | 1783270 | Bacteria | Bacteria | 69.4 | 1.33e-7 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g196567 | i0 | 90.566 | 50.8571428571429 | 53 | 3 | 32 | 2 | 99 | 150 | 2688479 | 2688428 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 8188 | 69.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 22552021 | 22552021 | PRJNA900028_P_NODE_192498_length_161_cov_0.910714_g191749_i0 | PRJNA900028 | 192498 | 161 | 0.910714 | 1.46624954 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 108 | 2.81e-19 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g191749 | i0 | 83.333 | 22.5217391304348 | 120 | 16 | 73 | 3 | 40 | 157 | 4033149 | 4033032 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 3626 | 108 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 22552950 | 22552950 | PRJNA900028_P_NODE_89158_length_181_cov_1.159091_g88409_i0 | PRJNA900028 | 89158 | 181 | 1.159091 | 2.09795471 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 58.4 | 3.3e-4 | NTclustered | gi|2621703971|emb|OY762926.1| | 2026742 | g88409 | i0 | 97.059 | 0.497237569060773 | 34 | 1 | 19 | 0 | 40 | 73 | 503986 | 503953 | MAG: Gemmatimonadota bacterium isolate 6e3ee631-f785-49ea-85f7-2f24cfa146af genome assembly, chromosome: 1 | blastn | 90 | 58.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;