RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA900028" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA900028 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10173914 10173914 PRJNA900028_P_NODE_45968_length_213_cov_0.932927_g45219_i0 PRJNA900028 45968 213 0.932927 1.98713451 Parachlamydia 83551 Bacteria Bacteria 237 4.82e-58   NTclustered gi|470491594|ref|NR_077046.1| 83552 g45219 i0 96.528 164.267605633803 144 3 67 2 7 149 1620 1762 Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence blastn 34989 237 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia acanthamoebae
18726050 18726050 PRJNA900028_P_NODE_135515_length_166_cov_0.871795_g134766_i0 PRJNA900028 135515 166 0.871795 1.4471797 Candidatus Rhabdochlamydia oedothoracis 2720720 Bacteria Bacteria 246 5.94e-61   NTclustered gi|2076407543|gb|CP075587.1| 2720720 g134766 i0 93.413 2.02409638554217 167 10 100 1 1 166 1341201 1341035 Candidatus Rhabdochlamydia oedothoracis isolate W744xW776 chromosome, complete genome blastn 336 246 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia oedothoracis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;