contig_metadata
43 rows where analysis = "blastn", bioproject = "PRJNA900028" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 875236 | 875236 | PRJNA900028_P_NODE_195521_length_161_cov_0.910714_g194772_i0 | PRJNA900028 | 195521 | 161 | 0.910714 | 1.46624954 | Campylobacter showae | 204 | Bacteria | Bacteria | 239 | 9.57e-59 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g194772 | i0 | 93.711 | 11.888198757764 | 159 | 10 | 99 | 0 | 1 | 159 | 1049023 | 1048865 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 1914 | 239 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 876050 | 876050 | PRJNA900028_P_NODE_8221_length_380_cov_2.809668_g7475_i0 | PRJNA900028 | 8221 | 380 | 2.809668 | 10.6767384 | Campylobacter showae | 204 | Bacteria | Bacteria | 702 | 0 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g7475 | i0 | 100 | 224.960526315789 | 380 | 0 | 100 | 0 | 1 | 380 | 389475 | 389854 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 85485 | 702 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 1244941 | 1244941 | PRJNA900028_P_NODE_177701_length_162_cov_0.902655_g176952_i0 | PRJNA900028 | 177701 | 162 | 0.902655 | 1.4623011 | Campylobacter | 194 | Bacteria | Bacteria | 233 | 4.49e-57 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g176952 | i0 | 92.593 | 5 | 162 | 12 | 100 | 0 | 1 | 162 | 455916 | 455755 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 810 | 233 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 2150012 | 2150012 | PRJNA900028_P_NODE_148422_length_165_cov_0.879310_g147673_i0 | PRJNA900028 | 148422 | 165 | 0.87931 | 1.4508615 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 259 | 7.57e-65 | NTclustered | gi|909715533|gb|CP012195.1| | 1032069 | g147673 | i0 | 96.203 | 94.7575757575758 | 158 | 6 | 96 | 0 | 8 | 165 | 762419 | 762262 | Campylobacter ureolyticus RIGS 9880 chromosome, complete genome | blastn | 15635 | 259 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 2150050 | 2150050 | PRJNA900028_P_NODE_151962_length_164_cov_2.608696_g151213_i0 | PRJNA900028 | 151962 | 164 | 2.608696 | 4.27826144 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 281 | 1.6000000000000001e-71 | NTclustered | gi|1966876394|gb|CP068487.1| | 827 | g151213 | i0 | 97.561 | 23.5609756097561 | 164 | 4 | 100 | 0 | 1 | 164 | 1064076 | 1064239 | Campylobacter ureolyticus strain FDAARGOS_1102 chromosome | blastn | 3864 | 281 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 2520454 | 2520454 | PRJNA900028_P_NODE_144422_length_165_cov_0.879310_g143673_i0 | PRJNA900028 | 144422 | 165 | 0.87931 | 1.4508615 | Campylobacter | 194 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|1483583498|emb|LT631422.1| | 204 | g143673 | i0 | 100 | 5 | 165 | 0 | 100 | 0 | 1 | 165 | 59141 | 59305 | Campylobacter showae genome assembly, chromosome: I | blastn | 825 | 305 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 3425143 | 3425143 | PRJNA900028_P_NODE_108843_length_171_cov_2.172131_g108094_i0 | PRJNA900028 | 108843 | 171 | 2.172131 | 3.71434401 | Campylobacter concisus | 199 | Bacteria | Bacteria | 316 | 4.6e-82 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g108094 | i0 | 100 | 4.88888888888889 | 171 | 0 | 100 | 0 | 1 | 171 | 385215 | 385045 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 836 | 316 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 3425633 | 3425633 | PRJNA900028_P_NODE_160843_length_164_cov_0.886957_g160094_i0 | PRJNA900028 | 160843 | 164 | 0.886957 | 1.45460948 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 265 | 1.6199999999999998e-66 | NTclustered | gi|909715533|gb|CP012195.1| | 1032069 | g160094 | i0 | 95.732 | 5 | 164 | 7 | 100 | 0 | 1 | 164 | 1626904 | 1627067 | Campylobacter ureolyticus RIGS 9880 chromosome, complete genome | blastn | 820 | 265 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 3425899 | 3425899 | PRJNA900028_P_NODE_186683_length_161_cov_1.821429_g185934_i0 | PRJNA900028 | 186683 | 161 | 1.821429 | 2.93250069 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 239 | 9.57e-59 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g185934 | i0 | 93.711 | 1.97515527950311 | 159 | 10 | 99 | 0 | 2 | 160 | 1187741 | 1187899 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 318 | 239 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 3426624 | 3426624 | PRJNA900028_P_NODE_69923_length_189_cov_1.457143_g69174_i0 | PRJNA900028 | 69923 | 189 | 1.457143 | 2.75400027 | Campylobacter showae | 204 | Bacteria | Bacteria | 305 | 1.13e-78 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g69174 | i0 | 95.767 | 19.968253968254 | 189 | 8 | 100 | 0 | 1 | 189 | 552641 | 552829 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 3774 | 305 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 5978344 | 5978344 | PRJNA900028_P_NODE_180565_length_162_cov_0.902655_g179816_i0 | PRJNA900028 | 180565 | 162 | 0.902655 | 1.4623011 | Campylobacter showae | 204 | Bacteria | Bacteria | 255 | 9.570000000000001e-64 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g179816 | i0 | 95.062 | 6 | 162 | 8 | 100 | 0 | 1 | 162 | 265607 | 265446 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 972 | 255 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 5978497 | 5978497 | PRJNA900028_P_NODE_198005_length_161_cov_0.875000_g197256_i0 | PRJNA900028 | 198005 | 161 | 0.875 | 1.40875 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 259 | 7.34e-65 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g197256 | i0 | 95.652 | 2.96273291925466 | 161 | 7 | 100 | 0 | 1 | 161 | 1521382 | 1521542 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 477 | 259 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 6348813 | 6348813 | PRJNA900028_P_NODE_148185_length_165_cov_0.879310_g147436_i0 | PRJNA900028 | 148185 | 165 | 0.87931 | 1.4508615 | Campylobacter | 194 | Bacteria | Bacteria | 296 | 5.77e-76 | NTclustered | gi|1483583506|emb|LT631430.1| | 204 | g147436 | i0 | 99.387 | 1.97575757575758 | 163 | 1 | 99 | 0 | 3 | 165 | 25357 | 25519 | Campylobacter showae genome assembly, plasmid: VI | blastn | 326 | 296 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 8897778 | 8897778 | PRJNA900028_P_NODE_158767_length_164_cov_0.886957_g158018_i0 | PRJNA900028 | 158767 | 164 | 0.886957 | 1.45460948 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 298 | 1.59e-76 | NTclustered | gi|757804895|dbj|AP014723.1| | 1581011 | g158018 | i0 | 99.39 | 6.07317073170732 | 164 | 1 | 100 | 0 | 1 | 164 | 554854 | 555017 | Sulfurospirillum sp. UCH001 DNA, complete genome | blastn | 996 | 298 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum sp. UCH001 | ||
| 9802331 | 9802331 | PRJNA900028_P_NODE_11768_length_329_cov_1.782143_g11020_i0 | PRJNA900028 | 11768 | 329 | 1.782143 | 5.86325047 | Campylobacter rectus | 203 | Bacteria | Bacteria | 592 | 1.4799999999999996e-164 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g11020 | i0 | 99.088 | 255.197568389058 | 329 | 3 | 100 | 0 | 1 | 329 | 160340 | 160668 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 83960 | 592 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 9802637 | 9802637 | PRJNA900028_P_NODE_150068_length_165_cov_0.879310_g149319_i0 | PRJNA900028 | 150068 | 165 | 0.87931 | 1.4508615 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 189 | 1.01e-43 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g149319 | i0 | 87.356 | 2.10909090909091 | 174 | 11 | 99 | 7 | 3 | 165 | 1118370 | 1118197 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 348 | 189 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 11078674 | 11078674 | PRJNA900028_P_NODE_193429_length_161_cov_0.910714_g192680_i0 | PRJNA900028 | 193429 | 161 | 0.910714 | 1.46624954 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 259 | 7.34e-65 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g192680 | i0 | 95.652 | 2 | 161 | 7 | 100 | 0 | 1 | 161 | 939728 | 939888 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 322 | 259 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 11079603 | 11079603 | PRJNA900028_P_NODE_86169_length_182_cov_1.533835_g85420_i0 | PRJNA900028 | 86169 | 182 | 1.533835 | 2.7915797 | Campylobacter showae | 204 | Bacteria | Bacteria | 156 | 1.15e-33 | NTclustered | gi|1483583494|emb|LT631418.1| | 204 | g85420 | i0 | 87.97 | 0.730769230769231 | 133 | 15 | 73 | 1 | 51 | 182 | 196652 | 196520 | Campylobacter showae genome assembly, chromosome: I | blastn | 133 | 156 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 11079623 | 11079623 | PRJNA900028_P_NODE_87889_length_181_cov_1.545455_g87140_i0 | PRJNA900028 | 87889 | 181 | 1.545455 | 2.79727355 | Campylobacter rectus | 203 | Bacteria | Bacteria | 302 | 1.3800000000000001e-77 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g87140 | i0 | 96.685 | 2 | 181 | 6 | 100 | 0 | 1 | 181 | 1206332 | 1206152 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 362 | 302 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 12724751 | 12724751 | PRJNA900028_P_NODE_27370_length_246_cov_1.456853_g26621_i0 | PRJNA900028 | 27370 | 246 | 1.456853 | 3.58385838 | Campylobacter | 194 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|1207769205|gb|MF351718.1| | 199 | g26621 | i0 | 100 | 221.808943089431 | 246 | 0 | 100 | 0 | 1 | 246 | 1888 | 1643 | Campylobacter concisus strain H11O-S1 23S ribosomal RNA gene, partial sequence | blastn | 54565 | 455 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 15273380 | 15273380 | PRJNA900028_P_NODE_53712_length_204_cov_0.903226_g52963_i0 | PRJNA900028 | 53712 | 204 | 0.903226 | 1.84258104 | Campylobacter | 194 | Bacteria | Bacteria | 372 | 1.2e-98 | NTclustered | gi|1483583511|emb|LT631435.1| | 204 | g52963 | i0 | 99.51 | 156.823529411765 | 204 | 1 | 100 | 0 | 1 | 204 | 12387 | 12184 | Campylobacter showae genome assembly, plasmid: XI | blastn | 31992 | 372 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 16177365 | 16177365 | PRJNA900028_P_NODE_138213_length_166_cov_0.871795_g137464_i0 | PRJNA900028 | 138213 | 166 | 0.871795 | 1.4471797 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 296 | 5.82e-76 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g137464 | i0 | 98.795 | 2 | 166 | 2 | 100 | 0 | 1 | 166 | 935310 | 935145 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 332 | 296 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 16177774 | 16177774 | PRJNA900028_P_NODE_179813_length_162_cov_0.902655_g179064_i0 | PRJNA900028 | 179813 | 162 | 0.902655 | 1.4623011 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 239 | 9.64e-59 | NTclustered | gi|1966876394|gb|CP068487.1| | 827 | g179064 | i0 | 93.21 | 2.98148148148148 | 162 | 11 | 100 | 0 | 1 | 162 | 369981 | 369820 | Campylobacter ureolyticus strain FDAARGOS_1102 chromosome | blastn | 483 | 239 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 16177871 | 16177871 | PRJNA900028_P_NODE_191473_length_161_cov_0.910714_g190724_i0 | PRJNA900028 | 191473 | 161 | 0.910714 | 1.46624954 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 237 | 3.44e-58 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g190724 | i0 | 93.168 | 2 | 161 | 11 | 100 | 0 | 1 | 161 | 299355 | 299515 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 322 | 237 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 16178415 | 16178415 | PRJNA900028_P_NODE_5513_length_456_cov_1.540541_g4774_i0 | PRJNA900028 | 5513 | 456 | 1.540541 | 7.02486696 | Campylobacter showae | 204 | Bacteria | Bacteria | 832 | 0 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g4774 | i0 | 99.561 | 250.331140350877 | 456 | 2 | 100 | 0 | 1 | 456 | 390530 | 390985 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 114151 | 832 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 17452459 | 17452459 | PRJNA900028_P_NODE_100534_length_175_cov_1.619048_g99785_i0 | PRJNA900028 | 100534 | 175 | 1.619048 | 2.833334 | Campylobacter showae | 204 | Bacteria | Bacteria | 274 | 2.89e-69 | NTclustered | gi|1483583565|emb|LT631545.1| | 204 | g99785 | i0 | 97.5 | 4.68 | 160 | 4 | 91 | 0 | 13 | 172 | 667557 | 667398 | Campylobacter showae strain B32_SW genome assembly, chromosome: I | blastn | 819 | 274 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 17454411 | 17454411 | PRJNA900028_P_NODE_96754_length_177_cov_1.593750_g96005_i0 | PRJNA900028 | 96754 | 177 | 1.59375 | 2.8209375 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 300 | 4.84e-77 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g96005 | i0 | 97.175 | 12.9661016949153 | 177 | 5 | 100 | 0 | 1 | 177 | 865313 | 865489 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 2295 | 300 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 18725950 | 18725950 | PRJNA900028_P_NODE_126955_length_167_cov_0.864407_g126206_i0 | PRJNA900028 | 126955 | 167 | 0.864407 | 1.44355969 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 182 | 1.71e-41 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g126206 | i0 | 87.821 | 1.88622754491018 | 156 | 18 | 93 | 1 | 12 | 167 | 1130775 | 1130621 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 315 | 182 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 18726699 | 18726699 | PRJNA900028_P_NODE_21175_length_267_cov_1.169725_g20426_i0 | PRJNA900028 | 21175 | 267 | 1.169725 | 3.12316575 | Campylobacter showae | 204 | Bacteria | Bacteria | 449 | 7.410000000000001e-122 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g20426 | i0 | 97.004 | 17.314606741573 | 267 | 8 | 100 | 0 | 1 | 267 | 1524565 | 1524299 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 4623 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 18727357 | 18727357 | PRJNA900028_P_NODE_72255_length_188_cov_1.467626_g71506_i0 | PRJNA900028 | 72255 | 188 | 1.467626 | 2.75913688 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 187 | 4.2299999999999985e-43 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g71506 | i0 | 86.782 | 7.07978723404255 | 174 | 15 | 90 | 6 | 4 | 173 | 908133 | 907964 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 1331 | 187 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 18727641 | 18727641 | PRJNA900028_P_NODE_98315_length_176_cov_2.039370_g97566_i0 | PRJNA900028 | 98315 | 176 | 2.03937 | 3.5892912 | Campylobacter rectus | 203 | Bacteria | Bacteria | 276 | 8.090000000000001e-70 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g97566 | i0 | 94.886 | 6.93181818181818 | 176 | 9 | 100 | 0 | 1 | 176 | 2152799 | 2152974 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 1220 | 276 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 20001115 | 20001115 | PRJNA900028_P_NODE_126656_length_167_cov_0.864407_g125907_i0 | PRJNA900028 | 126656 | 167 | 0.864407 | 1.44355969 | Campylobacter concisus | 199 | Bacteria | Bacteria | 276 | 7.64e-70 | NTclustered | gi|1935888393|gb|CP049239.1| | 199 | g125907 | i0 | 96.951 | 7.77245508982036 | 164 | 5 | 98 | 0 | 4 | 167 | 1056392 | 1056555 | Campylobacter concisus strain P3UCO1 chromosome, complete genome | blastn | 1298 | 276 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 20002799 | 20002799 | PRJNA900028_P_NODE_95816_length_178_cov_1.131783_g95067_i0 | PRJNA900028 | 95816 | 178 | 1.131783 | 2.01457374 | Campylobacter showae | 204 | Bacteria | Bacteria | 285 | 1.3599999999999998e-72 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g95067 | i0 | 98.16 | 149.224719101124 | 163 | 3 | 92 | 0 | 1 | 163 | 1170259 | 1170421 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 26562 | 285 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 21276213 | 21276213 | PRJNA900028_P_NODE_104597_length_173_cov_2.451613_g103848_i0 | PRJNA900028 | 104597 | 173 | 2.451613 | 4.24129049 | Campylobacter rectus | 203 | Bacteria | Bacteria | 287 | 3.6600000000000005e-73 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g103848 | i0 | 97.059 | 8.74566473988439 | 170 | 5 | 98 | 0 | 2 | 171 | 1751556 | 1751725 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 1513 | 287 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 21276577 | 21276577 | PRJNA900028_P_NODE_137757_length_166_cov_0.871795_g137008_i0 | PRJNA900028 | 137757 | 166 | 0.871795 | 1.4471797 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 302 | 1.2500000000000001e-77 | NTclustered | gi|2581873871|gb|CP134842.1| | 2933791 | g137008 | i0 | 99.398 | 35.7349397590361 | 166 | 1 | 100 | 0 | 1 | 166 | 1837127 | 1837292 | Arcobacter cryaerophilus gv. pseudocryaerophilus strain LEO 65 chromosome, complete genome | blastn | 5932 | 302 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 21278038 | 21278038 | PRJNA900028_P_NODE_88357_length_181_cov_1.545455_g87608_i0 | PRJNA900028 | 88357 | 181 | 1.545455 | 2.79727355 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 285 | 1.39e-72 | NTclustered | gi|1966876394|gb|CP068487.1| | 827 | g87608 | i0 | 95.028 | 7.42541436464088 | 181 | 9 | 100 | 0 | 1 | 181 | 953424 | 953244 | Campylobacter ureolyticus strain FDAARGOS_1102 chromosome | blastn | 1344 | 285 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 22551402 | 22551402 | PRJNA900028_P_NODE_131418_length_166_cov_0.871795_g130669_i0 | PRJNA900028 | 131418 | 166 | 0.871795 | 1.4471797 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 263 | 5.9e-66 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g130669 | i0 | 95.181 | 2 | 166 | 8 | 100 | 0 | 1 | 166 | 832904 | 832739 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 332 | 263 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 22552861 | 22552861 | PRJNA900028_P_NODE_8058_length_384_cov_1.179104_g7312_i0 | PRJNA900028 | 8058 | 384 | 1.179104 | 4.52775936 | Campylobacter showae | 204 | Bacteria | Bacteria | 693 | 0 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g7312 | i0 | 99.219 | 235.302083333333 | 384 | 3 | 100 | 0 | 1 | 384 | 390449 | 390066 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 90356 | 693 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 23826465 | 23826465 | PRJNA900028_P_NODE_104599_length_173_cov_2.451613_g103850_i0 | PRJNA900028 | 104599 | 173 | 2.451613 | 4.24129049 | Campylobacter rectus | 203 | Bacteria | Bacteria | 316 | 4.67e-82 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g103850 | i0 | 100 | 5.93063583815029 | 171 | 0 | 99 | 0 | 1 | 171 | 2155943 | 2156113 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 1026 | 316 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 23826600 | 23826600 | PRJNA900028_P_NODE_115399_length_168_cov_1.714286_g114650_i0 | PRJNA900028 | 115399 | 168 | 1.714286 | 2.88000048 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 267 | 4.63e-67 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g114650 | i0 | 95.238 | 5.13690476190476 | 168 | 8 | 100 | 0 | 1 | 168 | 738893 | 739060 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 863 | 267 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 23826604 | 23826604 | PRJNA900028_P_NODE_11559_length_331_cov_2.812057_g10811_i0 | PRJNA900028 | 11559 | 331 | 2.812057 | 9.30790867 | uncultured Arcobacter sp. | 165434 | Bacteria | Bacteria | 320 | 7.74e-83 | NTclustered | gi|682122801|gb|KJ739652.1| | 165434 | g10811 | i0 | 89.683 | 194.111782477341 | 252 | 24 | 76 | 2 | 1 | 252 | 255 | 6 | Uncultured Arcobacter sp. clone ONWR3-May-27-2012 23S ribosomal RNA gene, partial sequence | blastn | 64251 | 320 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | uncultured Arcobacter sp. | ||
| 23828352 | 23828352 | PRJNA900028_P_NODE_94659_length_178_cov_1.581395_g93910_i0 | PRJNA900028 | 94659 | 178 | 1.581395 | 2.8148831 | Campylobacter showae | 204 | Bacteria | Bacteria | 274 | 2.95e-69 | NTclustered | gi|1622747600|gb|CP012544.1| | 204 | g93910 | i0 | 94.382 | 8 | 178 | 10 | 100 | 0 | 1 | 178 | 1431770 | 1431947 | Campylobacter showae strain ATCC 51146 chromosome, complete genome | blastn | 1424 | 274 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 24196919 | 24196919 | PRJNA900028_P_NODE_51399_length_206_cov_1.299363_g50650_i0 | PRJNA900028 | 51399 | 206 | 1.299363 | 2.67668778 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 381 | 2.0199999999999994e-101 | NTclustered | gi|2567115650|gb|OR125068.1| | 195 | g50650 | i0 | 100 | 121 | 206 | 0 | 100 | 0 | 1 | 206 | 137 | 342 | Campylobacter coli strain BA28N16 AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase (aac(6')-Ib) gene, partial cds | blastn | 24926 | 381 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;