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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA900028" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA900028 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
874476 874476 PRJNA900028_P_NODE_118181_length_167_cov_1.576271_g117432_i0 PRJNA900028 118181 167 1.576271 2.63237257 Abditibacteriota bacterium 2783868 Bacteria Bacteria 167 4.79e-37   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g117432 i0 85.03 2 167 21 99 3 2 166 2851875 2852039 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 334 167 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
8527125 8527125 PRJNA900028_P_NODE_107267_length_172_cov_1.658537_g106518_i0 PRJNA900028 107267 172 1.658537 2.85268364 Abditibacteriota bacterium 2783868 Bacteria Bacteria 119 1.4000000000000002e-22   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g106518 i0 79.29 0.982558139534884 169 35 98 0 1 169 3165434 3165266 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 169 119 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
14904060 14904060 PRJNA900028_P_NODE_9192_length_363_cov_1.337580_g8444_i0 PRJNA900028 9192 363 1.33758 4.8554154 Abditibacteriota bacterium 2783868 Bacteria Bacteria 446 1.35e-120   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g8444 i0 89.831 169.101928374656 354 27 96 7 16 363 2852243 2852593 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 61384 446 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
17454314 17454314 PRJNA900028_P_NODE_8794_length_370_cov_1.373832_g8048_i0 PRJNA900028 8794 370 1.373832 5.0831784 Abditibacteriota bacterium 2783868 Bacteria Bacteria 483 1.05e-131   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g8048 i0 90.323 257.472972972973 372 30 100 6 1 370 2851611 2851244 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 95265 483 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
20002760 20002760 PRJNA900028_P_NODE_93096_length_179_cov_1.253846_g92347_i0 PRJNA900028 93096 179 1.253846 2.24438434 Abditibacteriota bacterium 2783868 Bacteria Bacteria 248 1.8e-61   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g92347 i0 91.667 227.150837988827 180 14 100 1 1 179 2851893 2851714 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 40660 248 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
21276502 21276502 PRJNA900028_P_NODE_130637_length_166_cov_1.264957_g129888_i0 PRJNA900028 130637 166 1.264957 2.09982862 Abditibacteriota bacterium 2783868 Bacteria Bacteria 263 5.9e-66   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g129888 i0 95.181 2 166 8 100 0 1 166 2852108 2851943 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 332 263 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
23827200 23827200 PRJNA900028_P_NODE_173439_length_163_cov_0.894737_g172690_i0 PRJNA900028 173439 163 0.894737 1.45842131 Abditibacteriota bacterium 2783868 Bacteria Bacteria 137 3.65e-28   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g172690 i0 84.507 0.871165644171779 142 18 86 3 1 140 3409333 3409472 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 142 137 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;