RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA900028" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA900028 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5073097 5073097 PRJNA900028_P_NODE_188064_length_161_cov_1.366071_g187315_i0 PRJNA900028 188064 161 1.366071 2.19937431 root 1 Root_unresolved Root_unresolved 292 7.24e-75   NTclustered gi|18996831|gb|AF473887.1| 29281 g187315 i0 99.379 99.8136645962733 161 1 100 0 1 161 213 373 Uncultured crenarchaeote r-5_08K 16S ribosomal RNA gene, partial sequence blastn 16070 292 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
16178343 16178343 PRJNA900028_P_NODE_4933_length_484_cov_1.466667_g4197_i0 PRJNA900028 4933 484 1.466667 7.09866828 uncultured crenarchaeote 29281 Archaea Archaea 750 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g4197 i0 94.628 104.473140495868 484 26 100 0 1 484 42481 42964 Uncultured crenarchaeote genomic fragment 54d9 blastn 50565 750 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;