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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA900028" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 11 ✖

bioproject 1

  • PRJNA900028 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
874704 874704 PRJNA900028_P_NODE_142081_length_165_cov_1.318966_g141332_i0 PRJNA900028 142081 165 1.318966 2.1762939 Human papillomavirus 10566 Viruses Viruses 224 2.76e-54   NTclustered gi|1480689150|gb|MH777368.1| 10566 g141332 i0 100 3.92121212121212 121 0 100 0 45 165 1 121 MAG: Human papillomavirus isolate HPV-mSK_229, complete genome blastn 647 224 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
875831 875831 PRJNA900028_P_NODE_6281_length_429_cov_1.342105_g5538_i0 PRJNA900028 6281 429 1.342105 5.75763045 Gemykrogvirus 1985367 Viruses Viruses 734 0   NTclustered gi|2045610848|gb|MW183017.1| 1985367 g5538 i0 98.558 11.8414918414918 416 5 97 1 1 416 1699 2113 MAG: Gemykrogvirus isolate thr147gen1, complete genome blastn 5080 734 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus  
3426236 3426236 PRJNA900028_P_NODE_37123_length_225_cov_1.738636_g36374_i0 PRJNA900028 37123 225 1.738636 3.911931 Betapapillomavirus 5 334209 Viruses Viruses 411 2.869999999999999e-110   NTclustered gi|1031620547|gb|KR816172.1| 1851127 g36374 i0 99.556 1 225 1 100 0 1 225 5219 5443 Human papillomavirus type 185 isolate ACS003, complete genome blastn 225 411 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 5
5978461 5978461 PRJNA900028_P_NODE_194085_length_161_cov_0.910714_g193336_i0 PRJNA900028 194085 161 0.910714 1.46624954 Betapapillomavirus 2 333924 Viruses Viruses 292 7.24e-75   NTclustered gi|238623465|emb|FM955842.1| 587351 g193336 i0 99.379 5.63975155279503 161 1 100 0 1 161 4007 4167 Human papillomavirus type 113, complete genome blastn 908 292 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
11077903 11077903 PRJNA900028_P_NODE_11929_length_328_cov_0.913978_g11181_i0 PRJNA900028 11929 328 0.913978 2.99784784 Betapapillomavirus 2 333924 Viruses Viruses 606 5.249999999999998e-169   NTclustered gi|186461194|gb|EU410348.1| 518629 g11181 i0 100 12.9817073170732 328 0 100 0 1 328 6613 6940 Human papillomavirus type 110, complete genome blastn 4258 606 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
15273199 15273199 PRJNA900028_P_NODE_35832_length_228_cov_0.860335_g35083_i0 PRJNA900028 35832 228 0.860335 1.9615638 Genomoviridae 1910928 Viruses Viruses 422 1.34e-113   NTclustered gi|2045610848|gb|MW183017.1| 1985367 g35083 i0 100 7 228 0 100 0 1 228 1019 792 MAG: Gemykrogvirus isolate thr147gen1, complete genome blastn 1596 422 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus  
18726599 18726599 PRJNA900028_P_NODE_19215_length_275_cov_1.743363_g18466_i0 PRJNA900028 19215 275 1.743363 4.79424825 Betapapillomavirus 2 333924 Viruses Viruses 508 1.2499999999999999e-139   NTclustered gi|186461194|gb|EU410348.1| 518629 g18466 i0 100 4.83636363636364 275 0 100 0 1 275 2568 2294 Human papillomavirus type 110, complete genome blastn 1330 508 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
22552663 22552663 PRJNA900028_P_NODE_62578_length_194_cov_1.758621_g61829_i0 PRJNA900028 62578 194 1.758621 3.41172474 Betapapillomavirus 2 333924 Viruses Viruses 322 1.16e-83   NTclustered gi|238623465|emb|FM955842.1| 587351 g61829 i0 96.875 0.989690721649485 192 6 99 0 3 194 2422 2231 Human papillomavirus type 113, complete genome blastn 192 322 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
25100344 25100344 PRJNA900028_P_NODE_108200_length_172_cov_1.243902_g107451_i0 PRJNA900028 108200 172 1.243902 2.13951144 Human papillomavirus 10566 Viruses Viruses 318 1.2899999999999999e-82   NTclustered gi|1559669482|gb|MH777320.2| 10566 g107451 i0 100 4 172 0 100 0 1 172 6071 5900 MAG: Human papillomavirus isolate HPV-mSK_178, complete genome blastn 688 318 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
25101577 25101577 PRJNA900028_P_NODE_44620_length_214_cov_1.818182_g43871_i0 PRJNA900028 44620 214 1.818182 3.89090948 Betapapillomavirus 5 334209 Viruses Viruses 390 3.519999999999999e-104   NTclustered gi|1031620547|gb|KR816172.1| 1851127 g43871 i0 99.533 1 214 1 100 0 1 214 1968 1755 Human papillomavirus type 185 isolate ACS003, complete genome blastn 214 390 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 5
25472110 25472110 PRJNA900028_P_NODE_53580_length_204_cov_0.987097_g52831_i0 PRJNA900028 53580 204 0.987097 2.01367788 Gammapapillomavirus 325455 Viruses Viruses 366 5.599999999999998e-97   NTclustered gi|1559669553|gb|MH972562.2| 10566 g52831 i0 99.02 2 204 2 100 0 1 204 4646 4849 MAG: Human papillomavirus isolate HPV-mSK_101, complete genome blastn 408 366 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;