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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA900028" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 17 ✖

bioproject 1

  • PRJNA900028 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3425908 3425908 PRJNA900028_P_NODE_18763_length_277_cov_2.719298_g18014_i0 PRJNA900028 18763 277 2.719298 7.53245546 Allovahlkampfia sp. PKD 2011b 1217111 Heterolobosea other_Eukaryota 501 2.11e-137   NTclustered gi|399764159|gb|JQ271670.1| 1217111 g18014 i0 99.278 71.4476534296029 277 2 100 0 1 277 2848 3124 Allovahlkampfia sp. PKD 2011b strain PV66 18S ribosomal RNA gene, partial sequence blastn 19791 501 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011b
3426421 3426421 PRJNA900028_P_NODE_5303_length_465_cov_1.932692_g4564_i0 PRJNA900028 5303 465 1.932692 8.9870178 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 741 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g4564 i0 95.484 27.247311827957 465 19 100 2 1 465 4080 3618 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12670 741 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
4703202 4703202 PRJNA900028_P_NODE_13684_length_310_cov_2.697318_g12936_i0 PRJNA900028 13684 310 2.697318 8.3616858 Leishmania amazonensis 5659 Euglenozoa other_Eukaryota 135 2.8e-27   NTclustered gi|440222381|gb|JX030049.1| 5659 g12936 i0 75.841 46.7709677419355 327 46 99 28 1 308 379 67 Leishmania amazonensis isolate LaPH8.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 14499 135 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
5072699 5072699 PRJNA900028_P_NODE_113184_length_169_cov_1.700000_g112435_i0 PRJNA900028 113184 169 1.7 2.873 Leishmania 5658 Euglenozoa other_Eukaryota 252 1.3e-62   NTclustered gi|440222388|gb|JX030056.1| 5659 g112435 i0 93.491 88.8816568047337 169 11 100 0 1 169 7 175 Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence blastn 15021 252 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
6349720 6349720 PRJNA900028_P_NODE_84985_length_183_cov_1.119403_g84236_i0 PRJNA900028 84985 183 1.119403 2.04850749 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 54.7 0.004   NTclustered gi|2414483|emb|Y00055.1| 5656 g84236 i0 100 16.0054644808743 29 0 16 0 155 183 7400 7428 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 2929 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
8528048 8528048 PRJNA900028_P_NODE_198487_length_159_cov_2.145455_g197738_i0 PRJNA900028 198487 159 2.145455 3.41127345 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 267 4.3199999999999996e-67   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g197738 i0 96.855 58.811320754717 159 5 100 0 1 159 1870 2028 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9351 267 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12354206 12354206 PRJNA900028_P_NODE_22670_length_261_cov_1.235849_g21921_i0 PRJNA900028 22670 261 1.235849 3.22556589 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 460 3.3399999999999995e-125   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g21921 i0 98.467 3.1264367816092 261 4 100 0 1 261 3325 3585 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 816 460 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12725029 12725029 PRJNA900028_P_NODE_56450_length_201_cov_0.947368_g55701_i0 PRJNA900028 56450 201 0.947368 1.90420968 Scytomonadidae 2570650 Euglenozoa other_Eukaryota 163 7.74e-36   NTclustered gi|2228698|gb|U84731.1|PCU84731 56452 g55701 i0 97.872 23.4129353233831 94 2 47 0 108 201 1884 1791 Petalomonas cantuscygni small subunit ribosomal RNA gene, complete sequence blastn 4706 163 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
13629859 13629859 PRJNA900028_P_NODE_87391_length_182_cov_0.796992_g86642_i0 PRJNA900028 87391 182 0.796992 1.45052544 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.015   NTclustered gi|2119425873|ref|XM_044699205.1| 51637 g86642 i0 100 0.153846153846154 28 0 15 0 108 135 1133 1160 Naegleria lovaniensis uncharacterized protein (C9374_000906), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
13629984 13629984 PRJNA900028_P_NODE_9611_length_356_cov_2.657980_g8863_i0 PRJNA900028 9611 356 2.65798 9.4624088 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 481 3.63e-131   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g8863 i0 91.036 21.0477528089888 357 31 100 1 1 356 2437 2081 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7493 481 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
20001864 20001864 PRJNA900028_P_NODE_20976_length_268_cov_0.917808_g20227_i0 PRJNA900028 20976 268 0.917808 2.45972544 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 111 3.99e-20   NTclustered gi|2794842015|ref|XM_067899186.1| 2761500 g20227 i0 78.488 0.641791044776119 172 35 64 2 7 177 1 171 Porcisia hertigi uncharacterized protein (JKF63_03165), partial mRNA blastn 172 111 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
20002363 20002363 PRJNA900028_P_NODE_58556_length_198_cov_2.053691_g57807_i0 PRJNA900028 58556 198 2.053691 4.06630818 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 366 5.4e-97   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g57807 i0 100 64.2373737373737 198 0 100 0 1 198 3281 3084 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12719 366 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
21647046 21647046 PRJNA900028_P_NODE_156577_length_164_cov_0.886957_g155828_i0 PRJNA900028 156577 164 0.886957 1.45460948 Trypanosoma 5690 Euglenozoa other_Eukaryota 226 7.619999999999998e-55   NTclustered gi|46091659|dbj|AB175623.1| 169531 g155828 i0 91.566 123.310975609756 166 11 100 3 1 164 5641 5477 Trypanosoma grosi genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-7, isolate: HANTO blastn 20223 226 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grosi
22552554 22552554 PRJNA900028_P_NODE_54358_length_203_cov_0.993506_g53609_i0 PRJNA900028 54358 203 0.993506 2.01681718 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 207 3.57e-49   NTclustered gi|2239711898|gb|OM022895.1| 5693 g53609 i0 85.5 3.89655172413793 200 27 98 2 5 203 390 192 Trypanosoma cruzi strain Sylvio X/10 NADH dehydrogenase subunit 7 mRNA, complete cds; kinetoplast blastn 791 207 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
23827115 23827115 PRJNA900028_P_NODE_165239_length_163_cov_1.342105_g164490_i0 PRJNA900028 165239 163 1.342105 2.18763115 Allovahlkampfia sp. PKD 2011b 1217111 Heterolobosea other_Eukaryota 300 4.39e-77   NTclustered gi|399764159|gb|JQ271670.1| 1217111 g164490 i0 100 42.0061349693252 162 0 99 0 2 163 2330 2491 Allovahlkampfia sp. PKD 2011b strain PV66 18S ribosomal RNA gene, partial sequence blastn 6847 300 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011b
24196256 24196256 PRJNA900028_P_NODE_13459_length_312_cov_10.604563_g12711_i0 PRJNA900028 13459 312 10.604563 33.08623656 Leishmania 5658 Euglenozoa other_Eukaryota 311 4.36e-80   NTclustered gi|440222388|gb|JX030056.1| 5659 g12711 i0 97.778 70.9839743589744 180 4 58 0 130 309 3 182 Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence blastn 22147 311 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
24197149 24197149 PRJNA900028_P_NODE_779_length_1538_cov_10.474815_g226_i4 PRJNA900028 779 1538 10.474815 161.1026547 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 2272 0   NTclustered gi|59891965|gb|AY753625.1| 313291 g226 i4 93.214 100.786736020806 1562 78 100 21 1 1538 597 2154 Bodonidae sp. Pan2 18S ribosomal RNA gene, partial sequence blastn 155010 2272 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   Bodonidae sp. Pan2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;