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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA900028" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA900028 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2149907 2149907 PRJNA900028_P_NODE_135082_length_166_cov_0.871795_g134333_i0 PRJNA900028 135082 166 0.871795 1.4471797 Vannella septentrionalis 197531 Discosea other_Eukaryota 207 2.8e-49   NTclustered gi|300078499|gb|GU001161.1| 197531 g134333 i0 93.525 79.8313253012048 139 9 84 0 28 166 1725 1863 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13252 207 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
3797685 3797685 PRJNA900028_P_NODE_8723_length_371_cov_1.642857_g7977_i0 PRJNA900028 8723 371 1.642857 6.09499947 Physaraceae 1115744 Evosea other_Eukaryota 239 2.52e-58   NTclustered gi|34979689|gb|AY321115.1| 246612 g7977 i0 87.981 46.9919137466307 208 17 55 6 168 371 774 571 Physaridae sp. W2i small subunit ribosomal RNA gene, partial sequence blastn 17434 239 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae   Physaridae sp. W2i
4704364 4704364 PRJNA900028_P_NODE_58804_length_198_cov_1.369128_g58055_i0 PRJNA900028 58804 198 1.369128 2.71087344 Physarum pseudonotabile 1158133 Evosea other_Eukaryota 366 5.4e-97   NTclustered gi|1133507925|emb|LT670567.1| 1158133 g58055 i0 100 100.787878787879 198 0 100 0 1 198 107 304 Physarum pseudonotabile partial 18S rRNA gene, specimen voucher LE255717 blastn 19956 366 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum pseudonotabile
7252572 7252572 PRJNA900028_P_NODE_120566_length_167_cov_0.864407_g119817_i0 PRJNA900028 120566 167 0.864407 1.44355969 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 309 7.53e-80   NTclustered gi|292559443|ref|NC_013986.1| 5778 g119817 i0 100 1 167 0 100 0 1 167 13376 13542 Hartmannella vermiformis mitochondrion, complete genome blastn 167 309 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7623010 7623010 PRJNA900028_P_NODE_186606_length_161_cov_2.250000_g185857_i0 PRJNA900028 186606 161 2.25 3.6225 Vermamoeba 1260114 Tubulinea other_Eukaryota 298 1.56e-76   NTclustered gi|300078496|gb|GU001158.1| 5778 g185857 i0 100 80.472049689441 161 0 100 0 1 161 2341 2501 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12956 298 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
9804129 9804129 PRJNA900028_P_NODE_98908_length_176_cov_1.606299_g98159_i0 PRJNA900028 98908 176 1.606299 2.82708624 Soliformovum irregulare 435424 Evosea other_Eukaryota 137 3.98e-28   NTclustered gi|374255694|emb|HE614594.1| 435424 g98159 i0 87.097 48.1988636363636 124 12 69 2 1 121 328 206 Soliformovum irregulare partial 18S rRNA gene, strain ATCC 26826 blastn 8483 137 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
11079037 11079037 PRJNA900028_P_NODE_4129_length_529_cov_1.314583_g3404_i0 PRJNA900028 4129 529 1.314583 6.95414407 Physarum sp. LE 255714 1216082 Evosea other_Eukaryota 592 2.4699999999999993e-164   NTclustered gi|440919836|gb|JX035987.2| 1216082 g3404 i0 86.94 77.1153119092628 536 59 100 9 1 529 637 106 Physarum sp. LE 255714 18S ribosomal RNA gene, partial sequence blastn 40794 592 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum sp. LE 255714
11449447 11449447 PRJNA900028_P_NODE_869_length_1417_cov_1.751462_g443_i0 PRJNA900028 869 1417 1.751462 24.81821654 Didymium 5792 Evosea other_Eukaryota 1692 0   NTclustered gi|2687|emb|X60210.1| 5793 g443 i0 88.636 21.7960479887085 1408 137 98 16 1 1395 1264 2661 D.iridis LSU rRNA gene blastn 30885 1692 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
13629551 13629551 PRJNA900028_P_NODE_6051_length_437_cov_1.644330_g5309_i0 PRJNA900028 6051 437 1.64433 7.1857221 Fuligo septica 159720 Evosea other_Eukaryota 464 4.58e-126   NTclustered gi|37515398|emb|AJ584697.1| 159720 g5309 i0 86.105 31.7414187643021 439 52 100 9 1 437 6312 5881 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 13871 464 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
16547159 16547159 PRJNA900028_P_NODE_116853_length_168_cov_1.193277_g116104_i0 PRJNA900028 116853 168 1.193277 2.00470536 Physarum 5790 Evosea other_Eukaryota 302 1.27e-77   NTclustered gi|379141567|gb|JQ478431.1| 1158133 g116104 i0 99.398 93.3154761904762 166 1 99 0 1 166 1070 905 Physarum pseudonotabile voucher 255438 LE 18S ribosomal RNA gene, partial sequence blastn 15677 305 0.99016393442623 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum pseudonotabile
17453301 17453301 PRJNA900028_P_NODE_182154_length_162_cov_0.902655_g181405_i0 PRJNA900028 182154 162 0.902655 1.4623011 Physarum pusillum 385468 Evosea other_Eukaryota 169 1.28e-37   NTclustered gi|1543031419|gb|MK336174.1| 385468 g181405 i0 85.455 83.8827160493827 165 21 100 2 1 162 1728 1892 Physarum pusillum voucher RC14091001 small subunit ribosomal RNA gene, partial sequence blastn 13589 169 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum pusillum
17453509 17453509 PRJNA900028_P_NODE_22014_length_263_cov_1.906542_g21265_i0 PRJNA900028 22014 263 1.906542 5.01420546 Fuligo septica 159720 Evosea other_Eukaryota 193 1.36e-44   NTclustered gi|37515398|emb|AJ584697.1| 159720 g21265 i0 87.135 2.32319391634981 171 20 65 2 3 172 13834 14003 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 611 193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
17454231 17454231 PRJNA900028_P_NODE_8194_length_381_cov_1.536145_g7448_i0 PRJNA900028 8194 381 1.536145 5.85271245 Fuligo septica 159720 Evosea other_Eukaryota 675 0   NTclustered gi|381139266|emb|HE655083.1| 159720 g7448 i0 98.681 67.5616797900262 379 5 99 0 1 379 1269 1647 Fuligo septica partial 28S rRNA gene, isolate Mx-K28 blastn 25741 675 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
19097168 19097168 PRJNA900028_P_NODE_78295_length_186_cov_1.116788_g77546_i0 PRJNA900028 78295 186 1.116788 2.07722568 Physaraceae 1115744 Evosea other_Eukaryota 344 2.34e-90   NTclustered gi|34979689|gb|AY321115.1| 246612 g77546 i0 100 96.5537634408602 186 0 100 0 1 186 1541 1726 Physaridae sp. W2i small subunit ribosomal RNA gene, partial sequence blastn 17959 344 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae   Physaridae sp. W2i
21277677 21277677 PRJNA900028_P_NODE_56397_length_201_cov_1.000000_g55648_i0 PRJNA900028 56397 201 1 2.01 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 372 1.18e-98   NTclustered gi|701726736|gb|KM220702.1| 5778 g55648 i0 100 100.189054726368 201 0 100 0 1 201 15 215 Vermamoeba vermiformis isolate 143A 18S ribosomal RNA gene, partial sequence blastn 20138 372 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23827011 23827011 PRJNA900028_P_NODE_155619_length_164_cov_0.886957_g154870_i0 PRJNA900028 155619 164 0.886957 1.45460948 Dictyostelium purpureum 5786 Evosea other_Eukaryota 52.8 0.014   NTclustered gi|330792529|ref|XM_003284293.1| 5786 g154870 i0 100 0.170731707317073 28 0 17 0 91 118 1090 1063 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_148108), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
23827858 23827858 PRJNA900028_P_NODE_50979_length_207_cov_0.962025_g50230_i0 PRJNA900028 50979 207 0.962025 1.99139175 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 255 1.29e-63   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g50230 i0 98.611 57.6280193236715 144 2 70 0 64 207 6897 7040 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11929 255 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
25100546 25100546 PRJNA900028_P_NODE_128100_length_167_cov_0.864407_g127351_i0 PRJNA900028 128100 167 0.864407 1.44355969 Echinostelium coelocephalum 300234 Evosea other_Eukaryota 99 1.77e-16   NTclustered gi|210062521|gb|AY842033.2| 300234 g127351 i0 95.161 0.37125748502994 62 3 37 0 78 139 299 238 Echinostelium coelocephalum strain ATCC MYA-2964 18S ribosomal RNA gene, partial sequence blastn 62 99 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium coelocephalum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;