RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA897077" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA897077 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12352441 12352441 PRJNA897077_P_NODE_1030_length_919_cov_4.517730_g931_i0 PRJNA897077 1030 919 4.51773 41.5179387 Centrocestus formosanus 234883 Platyhelminthes Platyhelminthes 1555 0   NTclustered gi|2905014696|gb|PV021483.1| 234883 g931 i0 97.374 57.9542981501632 914 24 99 0 6 919 8528 9441 Centrocestus formosanus mitochondrion, complete genome blastn 53260 1555 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Heterophyidae Centrocestus Centrocestus formosanus
17451733 17451733 PRJNA897077_P_NODE_13494_length_270_cov_1.583756_g13367_i0 PRJNA897077 13494 270 1.583756 4.2761412 Centrocestus formosanus 234883 Platyhelminthes Platyhelminthes 411 3.5399999999999995e-110   NTclustered gi|2905014696|gb|PV021483.1| 234883 g13367 i0 94.074 1 270 16 100 0 1 270 8154 8423 Centrocestus formosanus mitochondrion, complete genome blastn 270 411 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Heterophyidae Centrocestus Centrocestus formosanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;