RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA897077" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA897077 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
873696 873696 PRJNA897077_P_NODE_1_length_7187_cov_25.882626_g0_i0 PRJNA897077 1 7187 25.882626 1860.18433062 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2876 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g0 i0 96.239 0.665646305829971 1755 62 67 4 5435 7187 5329 7081 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4784 2876 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
2148795 2148795 PRJNA897077_P_NODE_10162_length_309_cov_2.533898_g10035_i0 PRJNA897077 10162 309 2.533898 7.82974482 Ripiglaq virus 3130859 Viruses Viruses 80.5 1.32e-10   NTclustered gi|2717320975|gb|PP173161.1| 3130859 g10035 i0 82.292 19.3300970873786 96 14 30 3 1 94 6770 6676 MAG: Ripiglaq virus isolate KCAP3_k141_198887 genomic sequence blastn 5973 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Ripiglaq virus
5977131 5977131 PRJNA897077_P_NODE_9685_length_317_cov_1.344262_g9558_i0 PRJNA897077 9685 317 1.344262 4.26131054 Zebrafish picornavirus 1 2304617 Viruses Viruses 470 6.92e-128   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g9558 i0 93.375 3 317 21 100 0 1 317 5167 5483 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 951 470 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
12352450 12352450 PRJNA897077_P_NODE_10_length_4140_cov_34.527662_g0_i1 PRJNA897077 10 4140 34.527662 1429.4452068 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2876 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g0 i1 96.239 0.721739130434783 1755 62 72 4 2388 4140 5329 7081 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 2988 2876 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
17451840 17451840 PRJNA897077_P_NODE_194_length_1778_cov_44.815836_g0_i2 PRJNA897077 194 1778 44.815836 796.82556408 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2865 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g0 i2 96.125 0.987064116985377 1755 64 99 4 1 1753 7081 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 1755 2865 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;