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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA897077" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA897077 · 25 ✖

analysis 1

  • blastn · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
873716 873716 PRJNA897077_P_NODE_301_length_1536_cov_18.421053_g265_i0 PRJNA897077 301 1536 18.421053 282.94737408 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2682 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g265 i0 98.177 47.3678385416667 1536 28 100 0 1 1536 7181 5646 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 72757 2682 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
2148884 2148884 PRJNA897077_P_NODE_1502_length_778_cov_2.642553_g1391_i0 PRJNA897077 1502 778 2.642553 20.55906234 Trichinella spiralis 6334 Nematoda Nematoda 353 1.91e-92   NTclustered gi|339252409|ref|XM_003371380.1| 6334 g1391 i0 80.519 2.93573264781491 462 88 59 2 232 692 461 1 Trichinella spiralis troponin C, isoform 2 (Tsp_11636) mRNA, complete cds blastn 2284 353 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
3424474 3424474 PRJNA897077_P_NODE_2883_length_567_cov_9.321862_g2756_i0 PRJNA897077 2883 567 9.321862 52.85495754 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 948 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g2756 i0 96.825 30.8712522045855 567 18 100 0 1 567 4920 4354 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 17504 948 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
7251854 7251854 PRJNA897077_P_NODE_46_length_2673_cov_2.703846_g38_i0 PRJNA897077 46 2673 2.703846 72.27380358 Trichinella spiralis 6334 Nematoda Nematoda 697 0   NTclustered gi|339247610|ref|XM_003375391.1| 6334 g38 i0 75.251 3.28133183688739 1495 354 76 14 1180 2666 2551 4037 Trichinella spiralis putative myosin head (Tsp_08431) mRNA, complete cds blastn 8771 697 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
7251916 7251916 PRJNA897077_P_NODE_8186_length_342_cov_1.486989_g8059_i0 PRJNA897077 8186 342 1.486989 5.08550238 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 604 1.979999999999999e-168   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g8059 i0 98.538 9.13157894736842 342 5 100 0 1 342 12621 12280 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 3123 604 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
8526337 8526337 PRJNA897077_P_NODE_12687_length_278_cov_2.278049_g12560_i0 PRJNA897077 12687 278 2.278049 6.33297622 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 496 9.84e-136   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g12560 i0 99.27 1.57553956834532 274 2 99 0 1 274 8437 8710 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 438 496 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
9801330 9801330 PRJNA897077_P_NODE_10368_length_306_cov_4.828326_g10241_i0 PRJNA897077 10368 306 4.828326 14.77467756 Pearsonema plica 2025202 Nematoda Nematoda 243 1.58e-59   NTclustered gi|585724675|gb|KF836607.1| 2025202 g10241 i0 92.398 24.6732026143791 171 11 56 2 97 266 1997 2166 Capillaria plica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7550 243 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pearsonema Pearsonema plica
9801443 9801443 PRJNA897077_P_NODE_16188_length_251_cov_0.876404_g16061_i0 PRJNA897077 16188 251 0.876404 2.19977404 Meloidogyne incognita 6306 Nematoda Nematoda 422 1.4999999999999998e-113   NTclustered gi|1235720138|gb|MF510388.1| 6306 g16061 i0 97.189 4.65737051792829 249 7 99 0 3 251 495 247 Meloidogyne incognita fatty acid and retinol binding protein-1 mRNA, complete cds blastn 1169 422 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne incognita
9801535 9801535 PRJNA897077_P_NODE_2708_length_583_cov_1.476471_g2581_i0 PRJNA897077 2708 583 1.476471 8.60782593 Pearsonema plica 2025202 Nematoda Nematoda 95.3 9.44e-15   NTclustered gi|585724675|gb|KF836607.1| 2025202 g2581 i0 93.75 9.07547169811321 64 3 11 1 1 64 3099 3037 Capillaria plica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5291 95.3 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pearsonema Pearsonema plica
13627445 13627445 PRJNA897077_P_NODE_2331_length_627_cov_14.792419_g2204_i0 PRJNA897077 2331 627 14.792419 92.74846713 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1118 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g2204 i0 98.882 2.49282296650718 626 7 99 0 2 627 7819 7194 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1563 1118 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
13627486 13627486 PRJNA897077_P_NODE_471_length_1283_cov_3.707438_g416_i0 PRJNA897077 471 1283 3.707438 47.56642954 Trichinella spiralis 6334 Nematoda Nematoda 715 0   NTclustered gi|339254855|ref|XM_003372603.1| 6334 g416 i0 82.045 16.784099766173 841 149 65 2 129 968 1 840 Trichinella spiralis tropomyosin (Tsp_11392) mRNA, complete cds blastn 21534 715 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
13627559 13627559 PRJNA897077_P_NODE_891_length_985_cov_4.403509_g797_i0 PRJNA897077 891 985 4.403509 43.37456365 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1711 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g797 i0 98.067 50.0162436548223 983 19 99 0 3 985 482 1464 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 49266 1711 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
16176195 16176195 PRJNA897077_P_NODE_1013_length_925_cov_50.951878_g915_i0 PRJNA897077 1013 925 50.951878 471.3048715 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1650 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g915 i0 99.778 49.6421621621622 899 2 97 0 1 899 2379 3277 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 45919 1650 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
17451705 17451705 PRJNA897077_P_NODE_12134_length_284_cov_6.753555_g12007_i0 PRJNA897077 12134 284 6.753555 19.1800962 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 503 6.02e-138   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g12007 i0 98.592 1 284 4 100 0 1 284 8042 8325 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 284 503 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
17451854 17451854 PRJNA897077_P_NODE_2034_length_670_cov_8.867672_g1908_i0 PRJNA897077 2034 670 8.867672 59.4134024 Capillaria sp. ALS-2019 2651741 Nematoda Nematoda 185 6.31e-42   NTclustered gi|1811126246|gb|MN526255.1| 2651741 g1908 i0 91.791 14.710447761194 134 10 20 1 1 133 210 343 Capillaria sp. ALS-2019 large subunit ribosomal RNA gene, partial sequence blastn 9856 185 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Capillaria Capillaria sp. ALS-2019
17451977 17451977 PRJNA897077_P_NODE_7974_length_346_cov_2.285714_g7847_i0 PRJNA897077 7974 346 2.285714 7.90857044 Pristionchus sp. 13 RS5231 452807 Nematoda Nematoda 104 8.91e-18   NTclustered gi|150982219|gb|EF634698.1| 452807 g7847 i0 82.645 0.780346820809249 121 17 34 3 197 315 119 1 Pristionchus sp. 13 RS5231 large subunit ribosomal protein 29 (rpl-29) mRNA, complete cds blastn 270 104 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus sp. 13 RS5231
18725017 18725017 PRJNA897077_P_NODE_1355_length_816_cov_1.244953_g1248_i0 PRJNA897077 1355 816 1.244953 10.15881648 Trichinella spiralis 6334 Nematoda Nematoda 532 2.3999999999999993e-146   NTclustered gi|339233103|ref|XM_003381621.1| 6334 g1248 i0 80.826 56.8075980392157 678 130 83 0 137 814 795 118 Trichinella spiralis syntaxin-1A (Tsp_07354) mRNA, complete cds blastn 46355 532 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
18725229 18725229 PRJNA897077_P_NODE_8455_length_337_cov_17.295455_g8328_i0 PRJNA897077 8455 337 17.295455 58.28568335 Aonchotheca paranalis 2025203 Nematoda Nematoda 453 7.46e-123   NTclustered gi|1279640587|gb|MF621021.1| 2025203 g8328 i0 91.045 31.9436201780415 335 30 99 0 1 335 3889 3555 Aonchotheca paranalis isolate PL 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10765 453 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Aonchotheca Aonchotheca paranalis
18725238 18725238 PRJNA897077_P_NODE_875_length_996_cov_1.737811_g782_i0 PRJNA897077 875 996 1.737811 17.30859756 Trichinella spiralis 6334 Nematoda Nematoda 579 3.749999999999999e-160   NTclustered gi|339254111|ref|XM_003372231.1| 6334 g782 i0 81.612 70.8112449799197 707 122 71 7 294 996 1031 329 Trichinella spiralis moesin/ezrin/radixin protein (Tsp_10541) mRNA, complete cds blastn 70528 579 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
21275450 21275450 PRJNA897077_P_NODE_11197_length_295_cov_3.563063_g11070_i0 PRJNA897077 11197 295 3.563063 10.51103585 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 545 1.03e-150   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g11070 i0 100 98.7016949152542 295 0 100 0 1 295 575 869 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 29117 545 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
21275669 21275669 PRJNA897077_P_NODE_4757_length_443_cov_11.627027_g4630_i0 PRJNA897077 4757 443 11.627027 51.50772961 Trichinella spiralis 6334 Nematoda Nematoda 158 8.83e-34   NTclustered gi|1938390596|gb|MW302146.1| 6334 g4630 i0 90.678 24.8600451467269 118 11 27 0 1 118 6356 6239 Trichinella spiralis isolate Europe-Poland-22D20-B small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11013 158 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
22550488 22550488 PRJNA897077_P_NODE_19578_length_243_cov_0.917647_g19451_i0 PRJNA897077 19578 243 0.917647 2.22988221 Trichuris muris 70415 Nematoda Nematoda 219 2.0399999999999998e-52   NTclustered gi|806642205|gb|KP719115.1| 70415 g19451 i0 85.047 3.52263374485597 214 32 88 0 1 214 717 504 Trichuris muris clone slo-1.2c Slo-1 mRNA, complete cds, alternatively spliced blastn 856 219 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris muris
22550546 22550546 PRJNA897077_P_NODE_4858_length_439_cov_8.177596_g4731_i0 PRJNA897077 4858 439 8.177596 35.89964644 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 765 0   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g4731 i0 99.524 87.371298405467 420 2 96 0 2 421 420 1 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 38356 765 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
23825715 23825715 PRJNA897077_P_NODE_139_length_1953_cov_2.737234_g121_i0 PRJNA897077 139 1953 2.737234 53.45818002 Ancylostoma caninum 29170 Nematoda Nematoda 669 0   NTclustered gi|86160923|gb|DQ358106.1| 29170 g121 i0 74.357 0.836661546338966 1634 389 83 27 335 1953 2708 1090 Ancylostoma caninum paramyosin mRNA, complete cds blastn 1634 669 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
23825900 23825900 PRJNA897077_P_NODE_6679_length_376_cov_10.554455_g6552_i0 PRJNA897077 6679 376 10.554455 39.6847508 Capillaria sp. ALS-2019 2651741 Nematoda Nematoda 268 3.27e-67   NTclustered gi|1811126246|gb|MN526255.1| 2651741 g6552 i0 99.324 39.7340425531915 148 1 57 0 229 376 1044 1191 Capillaria sp. ALS-2019 large subunit ribosomal RNA gene, partial sequence blastn 14940 268 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Capillaria Capillaria sp. ALS-2019

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;