contig_metadata
23 rows where analysis = "blastn", bioproject = "PRJNA897077" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3424389 | 3424389 | PRJNA897077_P_NODE_15803_length_252_cov_0.871508_g15676_i0 | PRJNA897077 | 15803 | 252 | 0.871508 | 2.19620016 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2536852070|gb|CP129374.1| | 1282 | g15676 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 2067925 | 2067674 | Staphylococcus epidermidis strain CSMH-411EB chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 5072194 | 5072194 | PRJNA897077_P_NODE_15724_length_252_cov_0.871508_g15597_i0 | PRJNA897077 | 15724 | 252 | 0.871508 | 2.19620016 | root | 1 | Root_unresolved | Root_unresolved | 466 | 6.89e-127 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g15597 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 1779744 | 1779995 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 5976961 | 5976961 | PRJNA897077_P_NODE_18885_length_244_cov_0.912281_g18758_i0 | PRJNA897077 | 18885 | 244 | 0.912281 | 2.22596564 | Enterococcus faecalis | 1351 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1963759427|emb|LR962161.1| | 1351 | g18758 | i0 | 100 | 100 | 244 | 0 | 100 | 0 | 1 | 244 | 603431 | 603188 | Enterococcus faecalis isolate 26975_2#91 genome assembly, chromosome: 1 | blastn | 24400 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 7251926 | 7251926 | PRJNA897077_P_NODE_8526_length_336_cov_3.844106_g8399_i0 | PRJNA897077 | 8526 | 336 | 3.844106 | 12.91619616 | Aedoeadaptatus ivorii | 54006 | Bacteria | Bacteria | 499 | 9.42e-137 | NTclustered | gi|1540269385|emb|LR134523.1| | 54006 | g8399 | i0 | 93.713 | 392.220238095238 | 334 | 19 | 99 | 1 | 3 | 336 | 455966 | 455635 | Peptoniphilus ivorii strain NCTC13079 genome assembly, chromosome: 1 | blastn | 131786 | 499 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Aedoeadaptatus | Aedoeadaptatus ivorii | ||
| 7622228 | 7622228 | PRJNA897077_P_NODE_9346_length_322_cov_1.702811_g9219_i0 | PRJNA897077 | 9346 | 322 | 1.702811 | 5.48305142 | Streptococcus | 1301 | Bacteria | Bacteria | 590 | 5.18e-164 | NTclustered | gi|2007100869|gb|CP071697.1| | 1307 | g9219 | i0 | 99.69 | 395.003105590062 | 323 | 0 | 100 | 1 | 1 | 322 | 20301 | 19979 | Streptococcus suis strain 1112S chromosome, complete genome | blastn | 127191 | 595 | 0.991596638655462 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus suis | ||
| 11447894 | 11447894 | PRJNA897077_P_NODE_269_length_1596_cov_7.588969_g236_i0 | PRJNA897077 | 269 | 1596 | 7.588969 | 121.11994524 | Clostridium | 1485 | Bacteria | Bacteria | 54.7 | 0.046 | NTclustered | gi|2425298477|gb|CP114763.1| | 1492 | g236 | i0 | 100 | 0.381578947368421 | 29 | 0 | 2 | 0 | 1441 | 1469 | 3511036 | 3511064 | Clostridium butyricum strain LV1 chromosome 1, complete sequence | blastn | 609 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium butyricum | ||
| 11447924 | 11447924 | PRJNA897077_P_NODE_6789_length_374_cov_1.036545_g6662_i0 | PRJNA897077 | 6789 | 374 | 1.036545 | 3.8766783 | Planococcus | 1372 | Bacteria | Bacteria | 54.7 | 0.01 | NTclustered | gi|2533127305|gb|CP129238.1| | 3058394 | g6662 | i0 | 94.444 | 0.192513368983957 | 36 | 0 | 9 | 2 | 186 | 219 | 2051090 | 2051125 | Planococcus liqunii strain N056 chromosome, complete genome | blastn | 72 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Planococcus | Planococcus liqunii | ||
| 12352564 | 12352564 | PRJNA897077_P_NODE_18110_length_246_cov_0.901734_g17983_i0 | PRJNA897077 | 18110 | 246 | 0.901734 | 2.21826564 | Exiguobacterium profundum | 307643 | Bacteria | Bacteria | 383 | 6.94e-102 | NTclustered | gi|2621702593|emb|OY760436.1| | 307643 | g17983 | i0 | 94.715 | 4.97560975609756 | 246 | 13 | 100 | 0 | 1 | 246 | 2551212 | 2550967 | MAG: Exiguobacterium profundum isolate 8ac3ae97-4b35-4674-8cf6-a299ed097117 genome assembly, chromosome: 1 | blastn | 1224 | 383 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium profundum | |||
| 12352589 | 12352589 | PRJNA897077_P_NODE_19450_length_243_cov_0.917647_g19323_i0 | PRJNA897077 | 19450 | 243 | 0.917647 | 2.22988221 | Staphylococcus caprae | 29380 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1467488938|dbj|AP018587.1| | 29380 | g19323 | i0 | 100 | 99.7448559670782 | 243 | 0 | 100 | 0 | 1 | 243 | 1512900 | 1513142 | Staphylococcus caprae JMUB898 DNA, complete genome | blastn | 24238 | 449 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus caprae | ||
| 12352602 | 12352602 | PRJNA897077_P_NODE_2130_length_656_cov_2.000000_g2004_i0 | PRJNA897077 | 2130 | 656 | 2 | 13.12 | Cohnella herbarum | 2728023 | Bacteria | Bacteria | 353 | 1.6e-92 | NTclustered | gi|1835036924|gb|CP051680.1| | 2728023 | g2004 | i0 | 76.866 | 545.78506097561 | 670 | 128 | 100 | 25 | 1 | 656 | 7674666 | 7675322 | Cohnella herbarum strain MFER-1 chromosome, complete genome | blastn | 358035 | 353 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Cohnella | Cohnella herbarum | ||
| 12723689 | 12723689 | PRJNA897077_P_NODE_18150_length_246_cov_0.901734_g18023_i0 | PRJNA897077 | 18150 | 246 | 0.901734 | 2.21826564 | Staphylococcus | 1279 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|1908784908|gb|CP051991.1| | 1280 | g18023 | i0 | 100 | 100 | 246 | 0 | 100 | 0 | 1 | 246 | 1829243 | 1829488 | Staphylococcus aureus strain ER08597.3 chromosome, complete genome | blastn | 24600 | 455 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 13998090 | 13998090 | PRJNA897077_P_NODE_4651_length_448_cov_2.418667_g4524_i0 | PRJNA897077 | 4651 | 448 | 2.418667 | 10.83562816 | Bacillus | 1386 | Bacteria | Bacteria | 52.8 | 0.043 | NTclustered | gi|2212750716|gb|CP063975.1| | 1396 | g4524 | i0 | 100 | 0.125 | 28 | 0 | 6 | 0 | 314 | 341 | 353136 | 353109 | Bacillus cereus strain N435-1 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 15272066 | 15272066 | PRJNA897077_P_NODE_18632_length_245_cov_0.906977_g18505_i0 | PRJNA897077 | 18632 | 245 | 0.906977 | 2.22209365 | Staphylococcus | 1279 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2536850969|gb|CP129362.1| | 1283 | g18505 | i0 | 100 | 35.3510204081633 | 245 | 0 | 100 | 0 | 1 | 245 | 1063787 | 1063543 | Staphylococcus haemolyticus strain CCSH-121 chromosome, complete genome | blastn | 8661 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 16546629 | 16546629 | PRJNA897077_P_NODE_11233_length_295_cov_1.405405_g11106_i0 | PRJNA897077 | 11233 | 295 | 1.405405 | 4.14594475 | Staphylococcus | 1279 | Bacteria | Bacteria | 545 | 1.03e-150 | NTclustered | gi|1908784908|gb|CP051991.1| | 1280 | g11106 | i0 | 100 | 100 | 295 | 0 | 100 | 0 | 1 | 295 | 874137 | 873843 | Staphylococcus aureus strain ER08597.3 chromosome, complete genome | blastn | 29500 | 545 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 19095648 | 19095648 | PRJNA897077_P_NODE_17375_length_248_cov_0.891429_g17248_i0 | PRJNA897077 | 17375 | 248 | 0.891429 | 2.21074392 | Bacilli | 91061 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2624851785|gb|CP120025.1| | 1280 | g17248 | i0 | 100 | 107.54435483871 | 248 | 0 | 100 | 0 | 1 | 248 | 2702308 | 2702061 | Staphylococcus aureus strain Dog145 chromosome, complete genome | blastn | 26671 | 459 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 19095672 | 19095672 | PRJNA897077_P_NODE_2055_length_667_cov_2.739057_g1929_i0 | PRJNA897077 | 2055 | 667 | 2.739057 | 18.26951019 | Streptococcus | 1301 | Bacteria | Bacteria | 1227 | 0 | NTclustered | gi|2197967995|gb|CP031970.1| | 1307 | g1929 | i0 | 99.85 | 391.481259370315 | 667 | 1 | 100 | 0 | 1 | 667 | 19714 | 20380 | Streptococcus suis strain SFJ44 chromosome, complete genome | blastn | 261118 | 1227 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus suis | ||
| 20000091 | 20000091 | PRJNA897077_P_NODE_11436_length_292_cov_1.424658_g11309_i0 | PRJNA897077 | 11436 | 292 | 1.424658 | 4.16000136 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 540 | 4.74e-149 | NTclustered | gi|2669659999|gb|CP090011.1| | 1290 | g11309 | i0 | 100 | 26.5719178082192 | 292 | 0 | 100 | 0 | 1 | 292 | 2163213 | 2163504 | Staphylococcus hominis strain acrlg chromosome, complete genome | blastn | 7759 | 540 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 21275535 | 21275535 | PRJNA897077_P_NODE_15717_length_252_cov_0.871508_g15590_i0 | PRJNA897077 | 15717 | 252 | 0.871508 | 2.19620016 | Anaerococcus sp. WGS1579 | 3366809 | Bacteria | Bacteria | 291 | 4.45e-74 | NTclustered | gi|2831319668|gb|CP171106.1| | 3366809 | g15590 | i0 | 88.477 | 0.964285714285714 | 243 | 25 | 96 | 3 | 1 | 243 | 734644 | 734405 | Anaerococcus sp. WGS1579 chromosome, complete genome | blastn | 243 | 291 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus sp. WGS1579 | ||
| 22921744 | 22921744 | PRJNA897077_P_NODE_11898_length_287_cov_1.420561_g11771_i0 | PRJNA897077 | 11898 | 287 | 1.420561 | 4.07701007 | Staphylococcus | 1279 | Bacteria | Bacteria | 531 | 2.799999999999999e-146 | NTclustered | gi|2482395019|gb|CP094927.1| | 1280 | g11771 | i0 | 100 | 100 | 287 | 0 | 100 | 0 | 1 | 287 | 544043 | 544329 | Staphylococcus aureus strain 13 chromosome, complete genome | blastn | 28700 | 531 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 23825708 | 23825708 | PRJNA897077_P_NODE_13579_length_269_cov_3.882653_g13452_i0 | PRJNA897077 | 13579 | 269 | 3.882653 | 10.44433657 | Acetilactobacillus jinshanensis | 1720083 | Bacteria | Bacteria | 453 | 5.78e-123 | NTclustered | gi|1595678381|gb|CP034726.1| | 1720083 | g13452 | i0 | 99.597 | 1.84386617100372 | 248 | 1 | 92 | 0 | 22 | 269 | 152034 | 152281 | Acetilactobacillus jinshanensis strain HSLZ-75 chromosome, complete genome | blastn | 496 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Acetilactobacillus | Acetilactobacillus jinshanensis | ||
| 23825795 | 23825795 | PRJNA897077_P_NODE_18499_length_245_cov_0.906977_g18372_i0 | PRJNA897077 | 18499 | 245 | 0.906977 | 2.22209365 | Acetilactobacillus jinshanensis | 1720083 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1595678381|gb|CP034726.1| | 1720083 | g18372 | i0 | 100 | 8.7265306122449 | 245 | 0 | 100 | 0 | 1 | 245 | 227420 | 227176 | Acetilactobacillus jinshanensis strain HSLZ-75 chromosome, complete genome | blastn | 2138 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Acetilactobacillus | Acetilactobacillus jinshanensis | ||
| 25099634 | 25099634 | PRJNA897077_P_NODE_18880_length_244_cov_0.912281_g18753_i0 | PRJNA897077 | 18880 | 244 | 0.912281 | 2.22596564 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1780387727|gb|CP046306.1| | 1290 | g18753 | i0 | 100 | 26 | 244 | 0 | 100 | 0 | 1 | 244 | 1366532 | 1366775 | Staphylococcus hominis strain FDAARGOS_746 chromosome, complete genome | blastn | 6344 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 25470871 | 25470871 | PRJNA897077_P_NODE_18200_length_246_cov_0.901734_g18073_i0 | PRJNA897077 | 18200 | 246 | 0.901734 | 2.21826564 | Staphylococcus | 1279 | Bacteria | Bacteria | 444 | 3.14e-120 | NTclustered | gi|2669659999|gb|CP090011.1| | 1290 | g18073 | i0 | 99.187 | 88.8211382113821 | 246 | 2 | 100 | 0 | 1 | 246 | 1294123 | 1294368 | Staphylococcus hominis strain acrlg chromosome, complete genome | blastn | 21850 | 444 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;