RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA896758" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA896758 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14900701 14900701 PRJNA896758_P_NODE_11132_length_344_cov_1.309963_g10742_i0 PRJNA896758 11132 344 1.309963 4.50627272 Chthoniobacter flavus 191863 Bacteria Bacteria 514 3.45e-141   NTclustered gi|183579828|emb|AM905425.1| 497964 g10742 i0 93.66 265.470930232558 347 16 100 6 1 344 2341 1998 Chthoniobacter flavus 23S rRNA gene, strain Ellin428 blastn 91322 514 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter flavus
14900809 14900809 PRJNA896758_P_NODE_25632_length_243_cov_0.905882_g25242_i0 PRJNA896758 25632 243 0.905882 2.20129326 Ereboglobus luteus 1796921 Bacteria Bacteria 130 9.84e-26   NTclustered gi|1387286769|gb|CP023004.1| 1796921 g25242 i0 78.713 1.52263374485597 202 38 83 3 15 215 1639177 1638980 Ereboglobus luteus strain Ho45, complete genome blastn 370 130 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Ereboglobus Ereboglobus luteus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;