RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA896758" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA896758 · 19 ✖

analysis 1

  • blastn · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
872956 872956 PRJNA896758_P_NODE_9541_length_369_cov_2.743243_g9151_i0 PRJNA896758 9541 369 2.743243 10.12256667 Mycotypha africana 64632 Fungi Fungi 145 5.62e-30   NTclustered gi|2432566513|ref|XM_053077614.1| 64632 g9151 i0 82.353 6.88617886178862 170 26 46 4 15 182 1095 1262 Mycotypha africana enolase (BDF20DRAFT_821422), partial mRNA blastn 2541 145 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
2148108 2148108 PRJNA896758_P_NODE_13442_length_314_cov_0.958506_g13052_i0 PRJNA896758 13442 314 0.958506 3.00970884 Gamsiella multidivaricata 101098 Fungi Fungi 63.9 1.36e-5   NTclustered gi|2323794760|ref|XM_051558859.1| 101098 g13052 i0 91.489 9.92356687898089 47 2 14 2 255 299 1223 1269 Gamsiella multidivaricata uncharacterized protein (BC939DRAFT_479507), partial mRNA blastn 3116 63.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
2148113 2148113 PRJNA896758_P_NODE_14582_length_300_cov_1.405286_g14192_i0 PRJNA896758 14582 300 1.405286 4.215858 Mycotypha africana 64632 Fungi Fungi 52.8 0.028   NTclustered gi|2432566207|ref|XM_053078878.1| 64632 g14192 i0 100 0.0933333333333333 28 0 9 0 53 80 811 784 Mycotypha africana uncharacterized protein (BDF20DRAFT_835808), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
5976083 5976083 PRJNA896758_P_NODE_13585_length_312_cov_1.343096_g13195_i0 PRJNA896758 13585 312 1.343096 4.19045952 Phycomyces blakesleeanus 4837 Fungi Fungi 183 9.909999999999998e-42   NTclustered gi|1069961705|ref|XM_018434095.1| 763407 g13195 i0 88.667 12.8365384615385 150 17 48 0 163 312 430 281 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 4005 183 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
7250918 7250918 PRJNA896758_P_NODE_16626_length_283_cov_1.414286_g16236_i0 PRJNA896758 16626 283 1.414286 4.00242938 Gamsiella multidivaricata 101098 Fungi Fungi 134 9.07e-27   NTclustered gi|2323769909|ref|XM_051559157.1| 101098 g16236 i0 84.444 41.2014134275618 135 21 48 0 147 281 453 319 Gamsiella multidivaricata putative 40S ribosomal protein S15 (BC939DRAFT_483018), partial mRNA blastn 11660 134 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
8525559 8525559 PRJNA896758_P_NODE_11447_length_339_cov_4.229323_g11057_i0 PRJNA896758 11447 339 4.229323 14.33740497 Gigaspora margarita 4874 Fungi Fungi 148 3.969999999999999e-31   NTclustered gi|658131758|emb|HF968812.1| 4874 g11057 i0 83.974 30.2772861356932 156 23 46 2 101 255 425 271 Gigaspora margarita partial 18S rRNA gene, strain BEG34, isolate spore 3, clone BS2_4_6 blastn 10264 148 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
8896846 8896846 PRJNA896758_P_NODE_5627_length_479_cov_5.825123_g5238_i0 PRJNA896758 5627 479 5.825123 27.90233917 Fungi 4751 Fungi Fungi 885 0   NTclustered gi|1694443677|ref|NG_065498.1| 4841 g5238 i0 100 100.008350730689 479 0 100 0 1 479 627 1105 Mucor racemosus NRRL 3640 18S rRNA gene, partial sequence; from TYPE material blastn 47904 885 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
9800706 9800706 PRJNA896758_P_NODE_26748_length_238_cov_2.800000_g26358_i0 PRJNA896758 26748 238 2.8 6.664 Gamsiella multidivaricata 101098 Fungi Fungi 209 1.2e-49   NTclustered gi|2323791169|ref|XM_051552466.1| 101098 g26358 i0 83.26 5.43697478991597 227 38 95 0 12 238 338 112 Gamsiella multidivaricata ribosomal protein S2, flavodoxin-like domain-containing protein (BC939DRAFT_399320), partial mRNA blastn 1294 209 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
13626698 13626698 PRJNA896758_P_NODE_8051_length_400_cov_1.394495_g7661_i0 PRJNA896758 8051 400 1.394495 5.57798 Halteromyces radiatus 101107 Fungi Fungi 65.8 4.92e-6   NTclustered gi|2323712100|ref|XM_051548800.1| 101107 g7661 i0 100 0.0875 35 0 9 0 185 219 346 312 Halteromyces radiatus uncharacterized protein (BX664DRAFT_377911), mRNA blastn 35 65.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
15271823 15271823 PRJNA896758_P_NODE_14632_length_299_cov_2.756637_g14242_i0 PRJNA896758 14632 299 2.756637 8.24234463 Mucor 4830 Fungi Fungi 553 6.25e-153   NTclustered gi|37786673|gb|AY213712.1| 4841 g14242 i0 100 99.7491638795987 299 0 100 0 1 299 407 705 Mucor racemosus strain UWFP 788 28S ribosomal RNA gene, partial sequence blastn 29825 553 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
16175668 16175668 PRJNA896758_P_NODE_7993_length_401_cov_2.307927_g7603_i0 PRJNA896758 7993 401 2.307927 9.25478727 Mucor mucedo 29922 Fungi Fungi 52.8 0.038   NTclustered gi|2324063258|ref|XM_051605159.1| 29922 g7603 i0 100 0.0698254364089776 28 0 7 0 37 64 2522 2495 Mucor mucedo uncharacterized protein (EV154DRAFT_553984), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
16546446 16546446 PRJNA896758_P_NODE_19073_length_266_cov_1.595855_g18683_i0 PRJNA896758 19073 266 1.595855 4.2449743 Mucor 4830 Fungi Fungi 492 1.2099999999999999e-134   NTclustered gi|1845966566|gb|MT523918.1| 97098 g18683 i0 100 100.018796992481 266 0 100 0 1 266 289 24 Mucor plumbeus strain CBS 111.07 small subunit ribosomal RNA gene, partial sequence blastn 26605 492 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor plumbeus
17451093 17451093 PRJNA896758_P_NODE_26134_length_242_cov_0.911243_g25744_i0 PRJNA896758 26134 242 0.911243 2.20520806 Calcarisporiella thermophila 911321 Fungi Fungi 189 1.5899999999999996e-43   NTclustered gi|2837871440|ref|XM_069396289.1| 911321 g25744 i0 82.273 7.70247933884298 220 37 90 2 24 242 2369 2587 Calcarisporiella thermophila uncharacterized protein (VTP21DRAFT_5735), partial mRNA blastn 1864 189 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
18724382 18724382 PRJNA896758_P_NODE_8615_length_386_cov_1.942492_g8225_i0 PRJNA896758 8615 386 1.942492 7.49801912 Gamsiella multidivaricata 101098 Fungi Fungi 226 2.0499999999999995e-54   NTclustered gi|2323805262|ref|XM_051557575.1| 101098 g8225 i0 78.571 51.9222797927461 364 62 92 14 31 386 32 387 Gamsiella multidivaricata ribosomal protein L23/L15e core domain-containing protein (BC939DRAFT_465886), mRNA blastn 20042 226 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
21274682 21274682 PRJNA896758_P_NODE_10517_length_353_cov_0.975000_g10127_i0 PRJNA896758 10517 353 0.975 3.44175 Mucor racemosus 4841 Fungi Fungi 647 0   NTclustered gi|225134681|gb|FJ345353.1| 4841 g10127 i0 99.717 54.4362606232295 353 1 100 0 1 353 3631 3983 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19216 647 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
21274738 21274738 PRJNA896758_P_NODE_18937_length_267_cov_1.587629_g18547_i0 PRJNA896758 18937 267 1.587629 4.23896943 Mucor mucedo 29922 Fungi Fungi 191 4.96e-44   NTclustered gi|2324072307|ref|XM_051603366.1| 29922 g18547 i0 81.897 0.868913857677903 232 37 85 5 2 229 2457 2687 Mucor mucedo RHD3/Sey1 (EV154DRAFT_526160), mRNA blastn 232 191 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
22549722 22549722 PRJNA896758_P_NODE_4278_length_551_cov_1.679916_g3892_i0 PRJNA896758 4278 551 1.679916 9.25633716 Phycomyces blakesleeanus 4837 Fungi Fungi 217 1.82e-51   NTclustered gi|1069959536|ref|XM_018440181.1| 763407 g3892 i0 79.412 10.7894736842105 306 63 56 0 1 306 268 573 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 5945 217 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
24195435 24195435 PRJNA896758_P_NODE_13219_length_316_cov_2.851852_g12829_i0 PRJNA896758 13219 316 2.851852 9.01185232 Mucor 4830 Fungi Fungi 582 8.489999999999998e-162   NTclustered gi|2580278665|gb|OR581588.1| 4841 g12829 i0 100 96.5316455696203 315 0 99 0 1 315 616 930 Mucor racemosus culture VKM:F-579 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30504 582 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
25098954 25098954 PRJNA896758_P_NODE_9820_length_364_cov_1.058419_g9430_i0 PRJNA896758 9820 364 1.058419 3.85264516 Zychaea mexicana 64656 Fungi Fungi 58.4 7.42e-4   NTclustered gi|2432146578|ref|XM_053122443.1| 64656 g9430 i0 94.595 0.101648351648352 37 2 10 0 179 215 162 198 Zychaea mexicana histone-fold-containing protein (BDB00DRAFT_808900), mRNA blastn 37 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;