RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA896758" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA896758 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12351772 12351772 PRJNA896758_P_NODE_1730_length_879_cov_2.928040_g1401_i0 PRJNA896758 1730 879 2.92804 25.7374716 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 736 0   NTclustered gi|2782873195|ref|XM_067061561.1| 252671 g1401 i0 85.513 82.7372013651877 711 95 81 6 1 708 49 754 PREDICTED: Clytia hemisphaerica tubulin alpha-1 chain-like (LOC136805029), mRNA blastn 72726 736 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
16175641 16175641 PRJNA896758_P_NODE_5173_length_499_cov_2.462441_g4784_i0 PRJNA896758 5173 499 2.462441 12.28758059 Anemonia sulcata 6108 Cnidaria other_Eukaryota 76.8 2.89e-9   NTclustered gi|2917940720|emb|OZ237562.1| 6108 g4784 i0 82.609 20.6693386773547 92 11 19 4 234 324 13791233 13791320 Anemonia sulcata genome assembly, chromosome: 8 blastn 10314 76.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
22921589 22921589 PRJNA896758_P_NODE_8918_length_381_cov_1.730519_g8528_i0 PRJNA896758 8918 381 1.730519 6.59327739 root 1 Root_unresolved Root_unresolved 52.8 0.036   NTclustered gi|2917940731|emb|OZ237564.1| 6108 g8528 i0 100 3.31233595800525 28 0 7 0 4 31 12984545 12984572 Anemonia sulcata genome assembly, chromosome: 10 blastn 1262 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;