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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA896758" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA896758 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4701506 4701506 PRJNA896758_P_NODE_9944_length_362_cov_1.332180_g9554_i0 PRJNA896758 9944 362 1.33218 4.8224916 Fimicolochytrium jonesii 1396493 Fungi Fungi 56.5 0.003   NTclustered gi|2432063027|ref|XM_053073854.1| 1396493 g9554 i0 100 0.0828729281767956 30 0 8 0 194 223 1622 1651 Fimicolochytrium jonesii DNA mismatch repair protein Mlh1 (EV422DRAFT_610004), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
12351752 12351752 PRJNA896758_P_NODE_13810_length_309_cov_4.478814_g13420_i0 PRJNA896758 13810 309 4.478814 13.83953526 Polychytrium aggregatum 110093 Fungi Fungi 174 5.9e-39   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g13420 i0 79.6 3.00323624595469 250 45 80 6 28 274 79 325 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 928 174 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
13626645 13626645 PRJNA896758_P_NODE_2791_length_690_cov_4.405186_g2422_i0 PRJNA896758 2791 690 4.405186 30.3957834 Polychytrium aggregatum 110093 Fungi Fungi 427 9.79e-115   NTclustered gi|2432142346|ref|XM_053110504.1| 110093 g2422 i0 82.164 33.2376811594203 499 87 72 2 117 614 576 79 Polychytrium aggregatum 60S ribosomal protein L19 (BJ171DRAFT_499802), mRNA blastn 22934 427 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
14900865 14900865 PRJNA896758_P_NODE_8272_length_394_cov_1.869159_g7882_i0 PRJNA896758 8272 394 1.869159 7.36448646 Synchytrium sp. 1971732 Fungi Fungi 104 1.03e-17   NTclustered gi|1168020523|gb|KY800404.1| 1971732 g7882 i0 78.528 0.413705583756345 163 31 41 4 91 251 1066 906 Synchytrium sp. voucher BPI 893319 large subunit ribosomal RNA gene, partial sequence blastn 163 104 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium sp.
16175590 16175590 PRJNA896758_P_NODE_22553_length_249_cov_0.875000_g22163_i0 PRJNA896758 22553 249 0.875 2.17875 Polychytrium aggregatum 110093 Fungi Fungi 383 7.04e-102   NTclustered gi|2432134095|ref|XM_053108010.1| 110093 g22163 i0 94.378 99.5622489959839 249 14 100 0 1 249 200 448 Polychytrium aggregatum tubulin, alpha, ubiquitous (BJ171DRAFT_438790), mRNA blastn 24791 383 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16175645 16175645 PRJNA896758_P_NODE_5593_length_481_cov_1.845588_g5204_i0 PRJNA896758 5593 481 1.845588 8.87727828 Polychytrium aggregatum 110093 Fungi Fungi 259 2.5700000000000003e-64   NTclustered gi|2432139102|ref|XM_053107495.1| 110093 g5204 i0 79.675 58.8336798336798 369 67 76 7 95 459 365 1 Polychytrium aggregatum ribosomal protein L34e-domain-containing protein (BJ171DRAFT_421619), partial mRNA blastn 28299 259 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16546476 16546476 PRJNA896758_P_NODE_3873_length_583_cov_2.845098_g3491_i0 PRJNA896758 3873 583 2.845098 16.58692134 Chytridiomycetes 451435 Fungi Fungi 412 2.2899999999999998e-110   NTclustered gi|2432134095|ref|XM_053108010.1| 110093 g3491 i0 89.969 53.3499142367067 319 32 55 0 265 583 1492 1174 Polychytrium aggregatum tubulin, alpha, ubiquitous (BJ171DRAFT_438790), mRNA blastn 31103 414 0.995169082125604 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17451021 17451021 PRJNA896758_P_NODE_17774_length_275_cov_1.524752_g17384_i0 PRJNA896758 17774 275 1.524752 4.193068 Polychytrium aggregatum 110093 Fungi Fungi 180 1.11e-40   NTclustered gi|2432137896|ref|XM_053110084.1| 110093 g17384 i0 85.635 20.1127272727273 181 14 64 9 36 210 34 208 Polychytrium aggregatum 40S ribosomal protein S29-like protein (BJ171DRAFT_495104), mRNA blastn 5531 180 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18724274 18724274 PRJNA896758_P_NODE_19115_length_266_cov_1.279793_g18725_i0 PRJNA896758 19115 266 1.279793 3.40424938 Polychytrium aggregatum 110093 Fungi Fungi 145 3.9e-30   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g18725 i0 86.364 4.52631578947368 132 18 50 0 116 247 155 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 1204 145 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
21274821 21274821 PRJNA896758_P_NODE_4777_length_520_cov_2.362416_g4389_i0 PRJNA896758 4777 520 2.362416 12.2845632 Polychytrium aggregatum 110093 Fungi Fungi 311 7.62e-80   NTclustered gi|2432152476|ref|XM_053111362.1| 110093 g4389 i0 82.857 55.9653846153846 350 56 67 4 80 427 610 263 Polychytrium aggregatum 50S ribosomal protein L30e-like protein (BJ171DRAFT_509224), mRNA blastn 29102 311 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22549760 22549760 PRJNA896758_P_NODE_9118_length_377_cov_1.519737_g8728_i0 PRJNA896758 9118 377 1.519737 5.72940849 Fimicolochytrium jonesii 1396493 Fungi Fungi 246 1.5299999999999998e-60   NTclustered gi|2432072949|ref|XM_053073468.1| 1396493 g8728 i0 80.428 89.1167108753316 327 60 86 4 53 377 688 364 Fimicolochytrium jonesii ubiquitin-related domain-containing protein (EV422DRAFT_586682), mRNA blastn 33597 246 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
23824967 23824967 PRJNA896758_P_NODE_18079_length_273_cov_1.540000_g17689_i0 PRJNA896758 18079 273 1.54 4.2042 Polychytrium aggregatum 110093 Fungi Fungi 180 1.1e-40   NTclustered gi|2432163634|ref|XM_053112058.1| 110093 g17689 i0 79.767 0.941391941391941 257 45 93 6 16 268 76 329 Polychytrium aggregatum 40S ribosomal protein S21 (BJ171DRAFT_516738), mRNA blastn 257 180 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;