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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA896758" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA896758 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2148156 2148156 PRJNA896758_P_NODE_19882_length_260_cov_1.834225_g19492_i0 PRJNA896758 19882 260 1.834225 4.768985 Allomyces arbusculus 64504 Fungi Fungi 252 2.18e-62   NTclustered gi|196052856|emb|FM200840.4| 64504 g19492 i0 85.02 1.90769230769231 247 37 95 0 14 260 1400 1154 Allomyces arbuscula mca II gene for calcium-dependent metacaspase CDP II, strain Burma 1Db blastn 496 252 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
2148242 2148242 PRJNA896758_P_NODE_462_length_1612_cov_4.494477_g304_i0 PRJNA896758 462 1612 4.494477 72.45096924 Blastocladiella emersonii 4808 Fungi Fungi 1938 0   NTclustered gi|117422539|gb|EF064246.1| 4808 g304 i0 91.613 71.863523573201 1407 110 87 8 184 1586 1474 72 Blastocladiella emersonii elongation factor alpha-like protein mRNA, complete cds blastn 115844 1938 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
2148267 2148267 PRJNA896758_P_NODE_7402_length_416_cov_9.358601_g7012_i0 PRJNA896758 7402 416 9.358601 38.93178016 Allomyces arbusculus 64504 Fungi Fungi 726 0   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g7012 i0 98.086 106.944711538462 418 6 100 2 1 416 2465 2882 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 44489 726 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
7250891 7250891 PRJNA896758_P_NODE_12346_length_327_cov_2.251969_g11956_i0 PRJNA896758 12346 327 2.251969 7.36393863 Blastocladiella emersonii 4808 Fungi Fungi 169 2.93e-37   NTclustered gi|111054102|gb|DQ787196.1| 4808 g11956 i0 80.804 2.62996941896024 224 36 69 5 102 325 3299 3083 Blastocladiella emersonii heat shock protein 90 kDa (hsp90) gene, complete cds blastn 860 169 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
12351882 12351882 PRJNA896758_P_NODE_9730_length_365_cov_2.955479_g9340_i0 PRJNA896758 9730 365 2.955479 10.78749835 Allomyces moniliformis 64506 Fungi Fungi 505 2.209999999999999e-138   NTclustered gi|321173707|gb|HQ888688.1| 64506 g9340 i0 91.644 58.4520547945205 371 21 100 8 1 365 1674 1308 Allomyces moniliformis strain India 3 18S ribosomal RNA gene, partial sequence blastn 21335 505 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces moniliformis
13997881 13997881 PRJNA896758_P_NODE_8931_length_381_cov_1.340909_g8541_i0 PRJNA896758 8931 381 1.340909 5.10886329 Allomyces 28581 Fungi Fungi 699 0   NTclustered gi|321173707|gb|HQ888688.1| 64506 g8541 i0 99.738 77.257217847769 381 1 100 0 1 381 962 582 Allomyces moniliformis strain India 3 18S ribosomal RNA gene, partial sequence blastn 29435 699 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces moniliformis
16175588 16175588 PRJNA896758_P_NODE_22373_length_249_cov_0.875000_g21983_i0 PRJNA896758 22373 249 0.875 2.17875 Allomyces macrogynus 28583 Fungi Fungi 309 1.21e-79   NTclustered gi|11467573|ref|NC_001715.1| 28583 g21983 i0 89.02 1.44176706827309 255 20 100 6 1 249 1400 1652 Allomyces macrogynus mitochondrion, complete genome blastn 359 309 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
18724393 18724393 PRJNA896758_P_NODE_9775_length_364_cov_7.329897_g9385_i0 PRJNA896758 9775 364 7.329897 26.68082508 Blastocladiella emersonii 4808 Fungi Fungi 270 8.76e-68   NTclustered gi|2440036|emb|X90411.1| 4808 g9385 i0 93.478 47.0467032967033 184 9 50 3 183 364 3381 3199 B.emersonii DNA for 28S ribosomal RNA gene blastn 17125 270 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
22549696 22549696 PRJNA896758_P_NODE_2458_length_734_cov_9.419062_g2099_i0 PRJNA896758 2458 734 9.419062 69.13591508 Allomyces moniliformis 64506 Fungi Fungi 1205 0   NTclustered gi|321173763|gb|HQ888744.1| 64506 g2099 i0 98.248 68.3950953678474 685 11 93 1 50 734 1 684 Allomyces moniliformis strain India 3 28S ribosomal RNA gene, partial sequence blastn 50202 1205 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces moniliformis
23825010 23825010 PRJNA896758_P_NODE_2199_length_776_cov_1.314367_g1848_i0 PRJNA896758 2199 776 1.314367 10.19948792 Blastocladiella emersonii 4808 Fungi Fungi 667 0   NTclustered gi|240254697|gb|FJ765531.1| 4808 g1848 i0 83.243 2.30541237113402 734 115 94 7 1 730 711 1440 Blastocladiella emersonii cGMP phosphodiesterase mRNA, complete cds blastn 1789 667 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;