RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA896758" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA896758 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17821455 17821455 PRJNA896758_P_NODE_20294_length_257_cov_1.673913_g19904_i0 PRJNA896758 20294 257 1.673913 4.30195641 Bacteria 2 Bacteria Bacteria 424 4.3e-114   NTclustered gi|563353835|gb|CP006915.1| 1394711 g19904 i0 96.498 261.661478599222 257 8 100 1 1 257 451110 451365 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 67247 425 0.997647058823529 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
21274805 21274805 PRJNA896758_P_NODE_26837_length_232_cov_2.578616_g26447_i0 PRJNA896758 26837 232 2.578616 5.98238912 Candidatus Saccharibacteria bacterium oral taxon 955 2572087 Bacteria Bacteria 296 8.68e-76   NTclustered gi|1805658607|gb|CP047918.1| 2572087 g26447 i0 89.655 9.88362068965517 232 24 100 0 1 232 795168 795399 Candidatus Saccharibacteria bacterium oral taxon 955 strain FS14P chromosome, complete genome blastn 2293 296 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 955
25098932 25098932 PRJNA896758_P_NODE_6360_length_451_cov_2.476190_g5970_i0 PRJNA896758 6360 451 2.47619 11.1676169 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 292 2.37e-74   NTclustered gi|2874253892|emb|OY970067.1| 991135 g5970 i0 80.096 1002.89135254989 417 64 91 11 43 451 4745338 4745743 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 452304 292 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;