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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA896758" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 22 ✖

bioproject 1

  • PRJNA896758 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
872952 872952 PRJNA896758_P_NODE_901_length_1225_cov_2.483507_g655_i0 PRJNA896758 901 1225 2.483507 30.42296075 Dictyostelium purpureum 5786 Evosea other_Eukaryota 983 0   NTclustered gi|330802803|ref|XM_003289355.1| 5786 g655 i0 82.562 91.216326530612207 1124 188 91 6 82 1201 1165 46 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72679), mRNA blastn 111740 983 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
1243925 1243925 PRJNA896758_P_NODE_2661_length_709_cov_1.300314_g2294_i0 PRJNA896758 2661 709 1.300314 9.21922626 Vexillifera 218659 Root_unresolved Root_unresolved 342 3.75e-89   NTclustered gi|221185864|gb|FJ577811.1| 590481 g2294 i0 85.886 25.5655853314528 333 34 45 7 258 578 1837 1506 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 18126 342 1 Eukaryota Amoebozoa             uncultured Amoebozoa
1243926 1243926 PRJNA896758_P_NODE_26761_length_237_cov_2.695122_g26371_i0 PRJNA896758 26761 237 2.695122 6.38743914 Flabellinia 1485085 Discosea other_Eukaryota 361 3.1099999999999996e-95   NTclustered gi|821391666|gb|KP862847.1| 1654810 g26371 i0 94.093 100.556962025316 237 14 100 0 1 237 475 711 Cunea thuwala isolate RS14G2.1 haplotype 1 actin gene, partial cds blastn 23832 361 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Cunea Cunea thuwala
2148220 2148220 PRJNA896758_P_NODE_26082_length_242_cov_0.911243_g25692_i0 PRJNA896758 26082 242 0.911243 2.20520806 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.022   NTclustered gi|1160554624|ref|XM_020573137.1| 670386 g25692 i0 100 0.115702479338843 28 0 12 0 29 56 51 24 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
3423651 3423651 PRJNA896758_P_NODE_25683_length_243_cov_0.905882_g25293_i0 PRJNA896758 25683 243 0.905882 2.20129326 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 139 1.63e-28   NTclustered gi|470487952|ref|XM_004344699.1| 1257118 g25293 i0 77.489 10.9094650205761 231 52 95 0 3 233 481 711 Acanthamoeba castellanii str. Neff phosphoribosylpyrophosphate synthetase (ACA1_280600), partial mRNA blastn 2651 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4701455 4701455 PRJNA896758_P_NODE_4044_length_568_cov_2.014141_g3660_i0 PRJNA896758 4044 568 2.014141 11.44032088 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 425 2.87e-114   NTclustered gi|470467440|ref|XM_004341747.1| 1257118 g3660 i0 84.941 73.3978873239437 425 59 74 4 147 567 696 273 Acanthamoeba castellanii str. Neff guanine nucleotide-binding protein beta subunit, putative (ACA1_199990), partial mRNA blastn 41690 425 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4701462 4701462 PRJNA896758_P_NODE_5104_length_503_cov_2.090698_g4716_i0 PRJNA896758 5104 503 2.090698 10.51621094 Dictyostelium discoideum 44689 Evosea other_Eukaryota 388 3.3e-103   NTclustered gi|66813933|ref|XM_636054.1| 352472 g4716 i0 82.916 84.0954274353877 439 67 86 8 1 435 697 1131 Dictyostelium discoideum AX4 hypothetical protein (act7) mRNA, complete cds blastn 42300 388 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5976226 5976226 PRJNA896758_P_NODE_8545_length_388_cov_0.977778_g8155_i0 PRJNA896758 8545 388 0.977778 3.79377864 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 250 1.22e-61   NTclustered gi|470380148|ref|XM_004333613.1| 1257118 g8155 i0 79.42 0.97680412371134 379 59 96 14 1 371 340 707 Acanthamoeba castellanii str. Neff actin bundling protein (ACA1_260120), partial mRNA blastn 379 250 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11076310 11076310 PRJNA896758_P_NODE_14769_length_298_cov_1.368889_g14379_i0 PRJNA896758 14769 298 1.368889 4.07928922 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 357 5.24e-94   NTclustered gi|470420192|ref|XM_004337221.1| 1257118 g14379 i0 88.255 101.667785234899 298 35 100 0 1 298 633 336 Acanthamoeba castellanii str. Neff actin-1, putative (ACA1_219820), partial mRNA blastn 30297 357 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11076451 11076451 PRJNA896758_P_NODE_6389_length_450_cov_2.220159_g5999_i0 PRJNA896758 6389 450 2.220159 9.9907155 Acytostelium subglobosum 361139 Evosea other_Eukaryota 58.4 0.001   NTclustered gi|831763891|ref|XM_012895554.1| 1410327 g5999 i0 100 0.315555555555556 31 0 7 0 173 203 839 869 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 142 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
12351790 12351790 PRJNA896758_P_NODE_20250_length_258_cov_0.908108_g19860_i0 PRJNA896758 20250 258 0.908108 2.34291864 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 71.3 6.48e-8   NTclustered gi|380350135|emb|HE605245.1| 590481 g19860 i0 84 0.705426356589147 75 10 29 2 176 249 342 269 Uncultured Amoebozoa genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, clone M1R-134 blastn 182 71.3 1 Eukaryota Amoebozoa             uncultured Amoebozoa
13626662 13626662 PRJNA896758_P_NODE_4151_length_560_cov_1.667351_g3767_i0 PRJNA896758 4151 560 1.667351 9.3371656 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 944 0   NTclustered gi|365928255|gb|JN825705.1| 590481 g3767 i0 97.321 42.4446428571429 560 8 100 4 1 560 973 421 Uncultured Amoebozoa clone Alchichica_AQ2b_5E_39 small subunit ribosomal RNA gene, partial sequence blastn 23769 944 1 Eukaryota Amoebozoa             uncultured Amoebozoa
13997805 13997805 PRJNA896758_P_NODE_10991_length_346_cov_1.512821_g10601_i0 PRJNA896758 10991 346 1.512821 5.23436066 Vermamoeba 1260114 Tubulinea other_Eukaryota 597 3.349999999999999e-166   NTclustered gi|300078496|gb|GU001158.1| 5778 g10601 i0 97.965 95.0520231213873 344 7 99 0 1 344 2619 2962 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 32888 597 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
14900726 14900726 PRJNA896758_P_NODE_15132_length_294_cov_0.891403_g14742_i0 PRJNA896758 15132 294 0.891403 2.62072482 Dictyostelium discoideum 44689 Evosea other_Eukaryota 63.9 1.26e-5   NTclustered gi|268637974|ref|XM_636093.2| 352472 g14742 i0 91.304 0.27891156462585 46 4 16 0 141 186 2417 2372 Dictyostelium discoideum AX4 ubiquitin system component Cue domain containing protein (ascc2) mRNA, complete cds blastn 82 63.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
14900742 14900742 PRJNA896758_P_NODE_17632_length_276_cov_1.502463_g17242_i0 PRJNA896758 17632 276 1.502463 4.14679788 Nannengaella leucopus 3231604 Evosea other_Eukaryota 207 5.12e-49   NTclustered gi|2329703254|gb|MW239998.1| 3231604 g17242 i0 80.882 19.286231884058 272 45 97 6 9 276 610 342 Physarum leucopus strain MA-Fungi 68971 alpha tubulin (aTUB) gene, partial cds blastn 5323 207 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Nannengaella Nannengaella leucopus
18724388 18724388 PRJNA896758_P_NODE_915_length_1214_cov_4.723050_g668_i0 PRJNA896758 915 1214 4.72305 57.337827 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 915 0   NTclustered gi|221185864|gb|FJ577811.1| 590481 g668 i0 95.051 30.5527182866557 586 22 86 7 561 1142 583 1 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 37091 915 1 Eukaryota Amoebozoa             uncultured Amoebozoa
21274677 21274677 PRJNA896758_P_NODE_10317_length_356_cov_1.360424_g9927_i0 PRJNA896758 10317 356 1.360424 4.84310944 Rhizomastix varia 1745347 Evosea other_Eukaryota 403 8.07e-108   NTclustered gi|944556463|gb|KP343611.1| 1745347 g9927 i0 87.079 99.1095505617977 356 46 100 0 1 356 576 221 Rhizomastix varia strain FBAN clone 2 actin gene, partial cds blastn 35283 403 1 Eukaryota Amoebozoa   Evosea       Rhizomastix Rhizomastix varia
22549631 22549631 PRJNA896758_P_NODE_16618_length_283_cov_1.457143_g16228_i0 PRJNA896758 16618 283 1.457143 4.12371469 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 261 3.99e-65   NTclustered gi|470383613|ref|XM_004333927.1| 1257118 g16228 i0 84.733 40.9964664310954 262 38 92 2 3 263 528 788 Acanthamoeba castellanii str. Neff extracellular response kinase, putative (ACA1_400280), partial mRNA blastn 11602 261 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23824941 23824941 PRJNA896758_P_NODE_13659_length_311_cov_1.941176_g13269_i0 PRJNA896758 13659 311 1.941176 6.03705736 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 244 4.47e-60   NTclustered gi|470455615|ref|XM_004340928.1| 1257118 g13269 i0 83.922 72.2636655948553 255 41 82 0 57 311 417 163 Acanthamoeba castellanii str. Neff ribosomal protein S23 (S12), putative (ACA1_232480), partial mRNA blastn 22474 244 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23825039 23825039 PRJNA896758_P_NODE_25859_length_242_cov_0.911243_g25469_i0 PRJNA896758 25859 242 0.911243 2.20520806 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 132 2.7200000000000003e-26   NTclustered gi|470460327|ref|XM_004341401.1| 1257118 g25469 i0 83.333 5.59090909090909 144 22 59 2 2 144 720 578 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_265890), partial mRNA blastn 1353 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23825072 23825072 PRJNA896758_P_NODE_6439_length_448_cov_1.600000_g6049_i0 PRJNA896758 6439 448 1.6 7.168 Dictyostelium discoideum 44689 Evosea other_Eukaryota 56.5 0.003   NTclustered gi|66820018|ref|XM_638571.1| 352472 g6049 i0 100 0.254464285714286 30 0 7 0 48 77 744 773 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0275337) mRNA, complete cds blastn 114 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
24195422 24195422 PRJNA896758_P_NODE_11099_length_344_cov_2.870849_g10709_i0 PRJNA896758 11099 344 2.870849 9.87572056 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 377 4.73e-100   NTclustered gi|511084914|dbj|AK419690.1| 5759 g10709 i0 87.021 98.375 339 38 98 4 1 336 66 401 Entamoeba histolytica cDNA clone: Xeh-005H14, actin, putative, complete cds, strain: HM-1:IMSS blastn 33841 377 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;