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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA896554" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA896554 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
871181 871181 PRJNA896554_P_NODE_20981_length_1742_cov_8.276812_g16767_i0 PRJNA896554 20981 1742 8.276812 144.18206504 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1633 0   NTclustered gi|302026154|gb|GQ377660.1| 188950 g16767 i0 99.664 72.1969001148106 893 3 51 0 342 1234 1 893 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 125767 1633 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
11074690 11074690 PRJNA896554_P_NODE_22529_length_1643_cov_13.714650_g17997_i0 PRJNA896554 22529 1643 13.71465 225.3316995 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1491 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g17997 i0 98.805 68.3061472915399 837 10 51 0 532 1368 837 1 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 112227 1491 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
11075235 11075235 PRJNA896554_P_NODE_56629_length_576_cov_1.413519_g49139_i0 PRJNA896554 56629 576 1.413519 8.14186944 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 424 1.05e-113   NTclustered gi|224996436|gb|FJ654268.1| 188950 g49139 i0 95.572 29.3680555555556 271 1 45 4 19 279 271 2 Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16916 424 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
13623320 13623320 PRJNA896554_P_NODE_113451_length_302_cov_11.257642_g105911_i0 PRJNA896554 113451 302 11.257642 33.99807884 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 479 1.09e-130   NTclustered gi|238617602|gb|FJ973377.1| 188950 g105911 i0 99.618 90.4039735099338 262 1 100 0 1 262 1076 815 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 27302 479 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
13626068 13626068 PRJNA896554_P_NODE_81691_length_392_cov_20.206897_g74151_i0 PRJNA896554 81691 392 20.206897 79.21103624 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 340 7.14e-89   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g74151 i0 83.636 54.6071428571429 385 40 98 15 1 383 3658 4021 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 21406 340 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
18722628 18722628 PRJNA896554_P_NODE_22735_length_1631_cov_12.691913_g17997_i1 PRJNA896554 22735 1631 12.691913 207.00510103 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1491 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g17997 i1 98.805 68.7958307786634 837 10 51 0 520 1356 837 1 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 112206 1491 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
25098161 25098161 PRJNA896554_P_NODE_74920_length_425_cov_6.198864_g67380_i0 PRJNA896554 74920 425 6.198864 26.345172 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 785 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g67380 i0 100 101.341176470588 425 0 100 0 1 425 2673 3097 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 43070 785 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;