contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA893346" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3795135 | 3795135 | PRJNA893346_P_NODE_17943_length_365_cov_1.729452_g17454_i0 | PRJNA893346 | 17943 | 365 | 1.729452 | 6.3124998 | Saprolegnia | 4769 | SAR_Eukaryotes | SAR_Eukaryotes | 267 | 1.14e-66 | NTclustered | gi|813139567|ref|XM_012343453.1| | 695850 | g17454 | i0 | 80.165 | 96.1013698630137 | 363 | 66 | 99 | 6 | 4 | 363 | 1594 | 1235 | Saprolegnia parasitica CBS 223.65 hsp70-like protein mRNA | blastn | 35077 | 267 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 7246467 | 7246467 | PRJNA893346_P_NODE_32806_length_253_cov_2.844444_g32316_i0 | PRJNA893346 | 32806 | 253 | 2.844444 | 7.19644332 | Achlya bisexualis | 4766 | SAR_Eukaryotes | SAR_Eukaryotes | 246 | 9.81e-61 | NTclustered | gi|2289|emb|X59936.1| | 4766 | g32316 | i0 | 85.185 | 87.5375494071146 | 243 | 33 | 95 | 3 | 1 | 240 | 243 | 1 | A.bisexualis gene for actin | blastn | 22147 | 246 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Achlya | Achlya bisexualis | ||
| 9796527 | 9796527 | PRJNA893346_P_NODE_8288_length_552_cov_1.411273_g7807_i0 | PRJNA893346 | 8288 | 552 | 1.411273 | 7.79022696 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 348 | 6.19e-91 | NTclustered | gi|2795023784|ref|XM_067929914.1| | 4785 | g7807 | i0 | 79.331 | 78.286231884058 | 508 | 95 | 91 | 9 | 45 | 547 | 1538 | 1036 | Phytophthora cinnamomi hsp70-like protein (IUM83_05758), partial mRNA | blastn | 43214 | 348 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 11071460 | 11071460 | PRJNA893346_P_NODE_15589_length_394_cov_0.716511_g15101_i0 | PRJNA893346 | 15589 | 394 | 0.716511 | 2.82305334 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 267 | 1.2399999999999998e-66 | NTclustered | gi|813138586|ref|XM_012343406.1| | 695850 | g15101 | i0 | 80.58 | 36.2918781725888 | 345 | 67 | 88 | 0 | 30 | 374 | 575 | 231 | Saprolegnia parasitica CBS 223.65 tubulin alpha chain mRNA | blastn | 14299 | 267 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 13997173 | 13997173 | PRJNA893346_P_NODE_38731_length_243_cov_0.858824_g38241_i0 | PRJNA893346 | 38731 | 243 | 0.858824 | 2.08694232 | Albugo | 65356 | SAR_Eukaryotes | SAR_Eukaryotes | 174 | 4.48e-39 | NTclustered | gi|325181694|emb|FR824064.1| | 890382 | g38241 | i0 | 82.266 | 25.7530864197531 | 203 | 34 | 83 | 2 | 1 | 202 | 12505 | 12706 | Albugo laibachii Nc14, genomic contig CONTIG_19_NC14_v4_197315_238 | blastn | 6258 | 174 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 19994484 | 19994484 | PRJNA893346_P_NODE_13576_length_424_cov_1.068376_g13090_i0 | PRJNA893346 | 13576 | 424 | 1.068376 | 4.52991424 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 283 | 1.33e-71 | NTclustered | gi|166043006|emb|CU355697.1| | 100861 | g13090 | i0 | 82.335 | 55.811320754717 | 334 | 51 | 78 | 6 | 2 | 331 | 364 | 693 | Aphanomyces euteiches cDNA | blastn | 23664 | 283 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 21269781 | 21269781 | PRJNA893346_P_NODE_15157_length_399_cov_3.984663_g14669_i0 | PRJNA893346 | 15157 | 399 | 3.984663 | 15.89880537 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 303 | 9.56e-78 | NTclustered | gi|673041888|ref|XM_008876683.1| | 157072 | g14669 | i0 | 80.556 | 97.5714285714286 | 396 | 75 | 99 | 2 | 2 | 396 | 329 | 723 | Aphanomyces invadans elongation factor 1-alpha mRNA | blastn | 38931 | 303 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 24194756 | 24194756 | PRJNA893346_P_NODE_15639_length_393_cov_0.962500_g15151_i0 | PRJNA893346 | 15639 | 393 | 0.9625 | 3.782625 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 379 | 1.52e-100 | NTclustered | gi|2795048880|ref|XM_067943659.1| | 4785 | g15151 | i0 | 84.675 | 66.6488549618321 | 385 | 53 | 97 | 6 | 1 | 382 | 402 | 21 | Phytophthora cinnamomi Calmodulin (IUM83_18649), partial mRNA | blastn | 26193 | 379 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;