RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA893346" and tax_phylum = "Negarnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA893346 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3795198 3795198 PRJNA893346_P_NODE_783_length_1670_cov_3.524734_g642_i0 PRJNA893346 783 1670 3.524734 58.8630578 Zebrafish influenza B-like virus RQ01 Viruses Viruses 944 0   NTclustered gi|2733713083|gb|PP810550.1| RQ01 g642 i0 78.334 88.4526946107784 1477 308 88 12 199 1670 199 1668 Influenza B virus (B/Michigan/UM-10057023818/2024) segment 5 nucleoprotein (NP) gene, complete cds blastn 147716 950 0.993684210526316 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
8896139 8896139 PRJNA893346_P_NODE_2447_length_1048_cov_6.811282_g2121_i0 PRJNA893346 2447 1048 6.811282 71.38223536 Zebrafish influenza B-like virus RQ01 Viruses Viruses 438 6.9899999999999996e-118   NTclustered gi|2413738156|gb|OQ034364.1| RQ01 g2121 i0 74.67 99.4522900763359 1062 233 100 32 1 1048 1053 14 Influenza B virus (B/Great Lakes/1739/1954) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds blastn 104226 438 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
11071807 11071807 PRJNA893346_P_NODE_2869_length_973_cov_5.240000_g2509_i0 PRJNA893346 2869 973 5.24 50.9852 Zebrafish influenza B-like virus RQ01 Viruses Viruses 579 3.6599999999999996e-160   NTclustered gi|2716343578|gb|PP647745.1| RQ01 g2509 i0 80.92 82.8232271325796 739 136 76 5 237 973 809 74 Influenza B virus (B/California/H20-358-8435_B_MP/2024) segment 7 matrix protein 1 (M1) and BM2 protein (BM2) genes, complete cds blastn 80587 579 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
11071996 11071996 PRJNA893346_P_NODE_36669_length_246_cov_0.890173_g36179_i0 PRJNA893346 36669 246 0.890173 2.18982558 Zebrafish influenza B-like virus RQ01 Viruses Viruses 209 1.25e-49   NTclustered gi|2915735270|gb|PV141215.1| RQ01 g36179 i0 82.427 9.66666666666667 239 42 97 0 8 246 239 1 Influenza B virus (B/King County/WA-S27676/2019) segment 1 polymerase PB1 (PB1) gene, complete cds blastn 2378 209 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
15271180 15271180 PRJNA893346_P_NODE_40072_length_241_cov_0.863095_g39582_i0 PRJNA893346 40072 241 0.863095 2.08005895 Paramyxoviridae 11158 Viruses Viruses 435 1.84e-117   NTclustered gi|2721617856|gb|PP711545.1| 251774 g39582 i0 99.17 80.2448132780083 241 2 100 0 1 241 749 989 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 19339 435 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
18719495 18719495 PRJNA893346_P_NODE_1995_length_1155_cov_4.365065_g1709_i0 PRJNA893346 1995 1155 4.365065 50.41650075 Zebrafish influenza B-like virus RQ01 Viruses Viruses 625 5.529999999999999e-174   NTclustered gi|2413738133|gb|OQ034387.1| RQ01 g1709 i0 80.143 72.8666666666667 841 163 73 4 317 1155 839 1 Influenza B virus (B/Michigan/1/1971) segment 7 matrix protein 1 (M1) and BM2 protein (BM2) genes, complete cds blastn 84161 625 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
20369644 20369644 PRJNA893346_P_NODE_716_length_1727_cov_3.243652_g589_i0 PRJNA893346 716 1727 3.243652 56.01787004 Zebrafish influenza B-like virus RQ01 Viruses Viruses 904 0   NTclustered gi|4760940|gb|AF100359.1|AF100359 RQ01 g589 i0 77.89 85.1215981470759 1479 309 85 15 9 1479 1661 193 Influenza B virus B/Victoria/2/87 segment 5 nucleoprotein (NP) gene, complete cds blastn 147005 904 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;